Protein–RNA interactions for Protein: Q8N616

LINC00311, Putative uncharacterized protein encoded by LINC00311, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00311Q8N616 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
LINC00311Q8N616 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LINC00311Q8N616 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC13.2□□□□□ -0.3
LINC00311Q8N616 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
LINC00311Q8N616 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LINC00311Q8N616 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
LINC00311Q8N616 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC13.2□□□□□ -0.3
LINC00311Q8N616 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LINC00311Q8N616 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LINC00311Q8N616 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
LINC00311Q8N616 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC13.2□□□□□ -0.3
LINC00311Q8N616 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
LINC00311Q8N616 AC011477.6-201ENST00000604980 1927 ntBASIC13.2□□□□□ -0.3
LINC00311Q8N616 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC13.2□□□□□ -0.3
LINC00311Q8N616 STOM-202ENST00000347359 870 ntTSL 2 BASIC13.2□□□□□ -0.3
LINC00311Q8N616 RPSAP43-201ENST00000402237 625 ntBASIC13.2□□□□□ -0.3
LINC00311Q8N616 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC13.2□□□□□ -0.3
LINC00311Q8N616 UPF3AP3-201ENST00000420996 769 ntBASIC13.2□□□□□ -0.3
LINC00311Q8N616 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC13.2□□□□□ -0.3
LINC00311Q8N616 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
LINC00311Q8N616 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC13.2□□□□□ -0.3
LINC00311Q8N616 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
LINC00311Q8N616 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC13.2□□□□□ -0.3
LINC00311Q8N616 AC069335.1-201ENST00000489972 472 ntBASIC13.2□□□□□ -0.3
LINC00311Q8N616 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC13.2□□□□□ -0.3
LINC00311Q8N616 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC13.2□□□□□ -0.3
LINC00311Q8N616 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LINC00311Q8N616 CCND1-203ENST00000536559 553 ntTSL 3 BASIC13.2□□□□□ -0.3
LINC00311Q8N616 TSFM-210ENST00000550559 897 ntTSL 5 BASIC13.2□□□□□ -0.3
LINC00311Q8N616 PAM16-215ENST00000577031 548 ntTSL 4 BASIC13.2□□□□□ -0.3
LINC00311Q8N616 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC13.2□□□□□ -0.3
LINC00311Q8N616 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LINC00311Q8N616 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC13.2□□□□□ -0.3
LINC00311Q8N616 AC022145.2-201ENST00000598203 171 ntBASIC13.2□□□□□ -0.3
LINC00311Q8N616 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
LINC00311Q8N616 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
LINC00311Q8N616 AL513210.1-201ENST00000629608 234 ntBASIC13.2□□□□□ -0.3
LINC00311Q8N616 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC13.2□□□□□ -0.3
LINC00311Q8N616 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LINC00311Q8N616 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC13.2□□□□□ -0.3
LINC00311Q8N616 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
LINC00311Q8N616 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
LINC00311Q8N616 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
LINC00311Q8N616 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
LINC00311Q8N616 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
LINC00311Q8N616 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC13.2□□□□□ -0.3
LINC00311Q8N616 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LINC00311Q8N616 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LINC00311Q8N616 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LINC00311Q8N616 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
LINC00311Q8N616 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC13.2□□□□□ -0.3
LINC00311Q8N616 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC13.2□□□□□ -0.3
LINC00311Q8N616 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
LINC00311Q8N616 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
LINC00311Q8N616 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
LINC00311Q8N616 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LINC00311Q8N616 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC13.19□□□□□ -0.3
LINC00311Q8N616 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
LINC00311Q8N616 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC13.19□□□□□ -0.3
LINC00311Q8N616 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LINC00311Q8N616 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC13.19□□□□□ -0.3
LINC00311Q8N616 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC13.19□□□□□ -0.3
LINC00311Q8N616 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC13.19□□□□□ -0.3
LINC00311Q8N616 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
LINC00311Q8N616 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
LINC00311Q8N616 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LINC00311Q8N616 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LINC00311Q8N616 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
LINC00311Q8N616 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
LINC00311Q8N616 ACE-203ENST00000413513 2237 ntTSL 2 BASIC13.19□□□□□ -0.3
LINC00311Q8N616 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LINC00311Q8N616 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
LINC00311Q8N616 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
LINC00311Q8N616 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LINC00311Q8N616 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
LINC00311Q8N616 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC13.19□□□□□ -0.3
LINC00311Q8N616 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
LINC00311Q8N616 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC13.19□□□□□ -0.3
LINC00311Q8N616 AC112482.1-201ENST00000492080 688 ntBASIC13.19□□□□□ -0.3
LINC00311Q8N616 AP000344.2-201ENST00000512987 629 ntBASIC13.19□□□□□ -0.3
LINC00311Q8N616 RNA5SP410-201ENST00000516285 106 ntBASIC13.19□□□□□ -0.3
LINC00311Q8N616 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LINC00311Q8N616 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LINC00311Q8N616 MIR4469-201ENST00000583919 79 ntBASIC13.19□□□□□ -0.3
LINC00311Q8N616 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC13.19□□□□□ -0.3
LINC00311Q8N616 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC13.19□□□□□ -0.3
LINC00311Q8N616 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
LINC00311Q8N616 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
LINC00311Q8N616 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
LINC00311Q8N616 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LINC00311Q8N616 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
LINC00311Q8N616 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC13.19□□□□□ -0.3
LINC00311Q8N616 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LINC00311Q8N616 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC13.19□□□□□ -0.3
LINC00311Q8N616 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC13.19□□□□□ -0.3
LINC00311Q8N616 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
LINC00311Q8N616 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
LINC00311Q8N616 PGR-209ENST00000617858 2816 ntTSL 5 BASIC13.19□□□□□ -0.3
LINC00311Q8N616 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LINC00311Q8N616 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms