Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC11.01□□□□□ -0.65
LINC01561Q8N1V8 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
LINC01561Q8N1V8 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
LINC01561Q8N1V8 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
LINC01561Q8N1V8 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
LINC01561Q8N1V8 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
LINC01561Q8N1V8 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
LINC01561Q8N1V8 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC11□□□□□ -0.65
LINC01561Q8N1V8 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
LINC01561Q8N1V8 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
LINC01561Q8N1V8 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
LINC01561Q8N1V8 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC11□□□□□ -0.65
LINC01561Q8N1V8 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC11□□□□□ -0.65
LINC01561Q8N1V8 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
LINC01561Q8N1V8 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
LINC01561Q8N1V8 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
LINC01561Q8N1V8 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC11□□□□□ -0.65
LINC01561Q8N1V8 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
LINC01561Q8N1V8 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC11□□□□□ -0.65
LINC01561Q8N1V8 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC11□□□□□ -0.65
LINC01561Q8N1V8 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
LINC01561Q8N1V8 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
LINC01561Q8N1V8 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
LINC01561Q8N1V8 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC11□□□□□ -0.65
LINC01561Q8N1V8 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
LINC01561Q8N1V8 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC11□□□□□ -0.65
LINC01561Q8N1V8 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC11□□□□□ -0.65
LINC01561Q8N1V8 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
LINC01561Q8N1V8 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
LINC01561Q8N1V8 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
LINC01561Q8N1V8 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
LINC01561Q8N1V8 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC11□□□□□ -0.65
LINC01561Q8N1V8 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC11□□□□□ -0.65
LINC01561Q8N1V8 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC11□□□□□ -0.65
LINC01561Q8N1V8 PMS2P4-201ENST00000412466 1052 ntBASIC11□□□□□ -0.65
LINC01561Q8N1V8 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC11□□□□□ -0.65
LINC01561Q8N1V8 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC11□□□□□ -0.65
LINC01561Q8N1V8 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC11□□□□□ -0.65
LINC01561Q8N1V8 FGFR3P6-201ENST00000457012 610 ntBASIC11□□□□□ -0.65
LINC01561Q8N1V8 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
LINC01561Q8N1V8 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC11□□□□□ -0.65
LINC01561Q8N1V8 RPS15P9-201ENST00000494093 319 ntBASIC11□□□□□ -0.65
LINC01561Q8N1V8 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC11□□□□□ -0.65
LINC01561Q8N1V8 IRF8-202ENST00000562492 946 ntTSL 3 BASIC11□□□□□ -0.65
LINC01561Q8N1V8 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC11□□□□□ -0.65
LINC01561Q8N1V8 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC11□□□□□ -0.65
LINC01561Q8N1V8 AC087388.1-201ENST00000571370 1112 ntBASIC11□□□□□ -0.65
LINC01561Q8N1V8 SDCCAG3P1-201ENST00000589292 1150 ntBASIC11□□□□□ -0.65
LINC01561Q8N1V8 AC138894.3-201ENST00000603787 634 ntBASIC11□□□□□ -0.65
LINC01561Q8N1V8 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC11□□□□□ -0.65
LINC01561Q8N1V8 AL121772.3-201ENST00000610840 674 ntBASIC11□□□□□ -0.65
LINC01561Q8N1V8 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC11□□□□□ -0.65
LINC01561Q8N1V8 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC11□□□□□ -0.65
LINC01561Q8N1V8 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
LINC01561Q8N1V8 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC11□□□□□ -0.65
LINC01561Q8N1V8 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC11□□□□□ -0.65
LINC01561Q8N1V8 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC11□□□□□ -0.65
LINC01561Q8N1V8 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC11□□□□□ -0.65
LINC01561Q8N1V8 CICP4-201ENST00000447359 2812 ntBASIC11□□□□□ -0.65
LINC01561Q8N1V8 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
LINC01561Q8N1V8 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC11□□□□□ -0.65
LINC01561Q8N1V8 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC11□□□□□ -0.65
LINC01561Q8N1V8 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC11□□□□□ -0.65
LINC01561Q8N1V8 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC11□□□□□ -0.65
LINC01561Q8N1V8 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
LINC01561Q8N1V8 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
LINC01561Q8N1V8 BRSK1-206ENST00000590333 2977 ntTSL 1 (best) BASIC11□□□□□ -0.65
LINC01561Q8N1V8 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
LINC01561Q8N1V8 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
LINC01561Q8N1V8 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
LINC01561Q8N1V8 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
LINC01561Q8N1V8 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
LINC01561Q8N1V8 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC11□□□□□ -0.65
LINC01561Q8N1V8 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC11□□□□□ -0.65
LINC01561Q8N1V8 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
LINC01561Q8N1V8 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC10.99□□□□□ -0.65
LINC01561Q8N1V8 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC10.99□□□□□ -0.65
LINC01561Q8N1V8 AC011477.6-201ENST00000604980 1927 ntBASIC10.99□□□□□ -0.65
LINC01561Q8N1V8 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC10.99□□□□□ -0.65
LINC01561Q8N1V8 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
LINC01561Q8N1V8 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
LINC01561Q8N1V8 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
LINC01561Q8N1V8 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC10.99□□□□□ -0.65
LINC01561Q8N1V8 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC10.99□□□□□ -0.65
LINC01561Q8N1V8 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC10.99□□□□□ -0.65
LINC01561Q8N1V8 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC10.99□□□□□ -0.65
LINC01561Q8N1V8 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC10.99□□□□□ -0.65
LINC01561Q8N1V8 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
LINC01561Q8N1V8 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC10.99□□□□□ -0.65
LINC01561Q8N1V8 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC10.99□□□□□ -0.65
LINC01561Q8N1V8 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
LINC01561Q8N1V8 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
LINC01561Q8N1V8 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC10.99□□□□□ -0.65
LINC01561Q8N1V8 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC10.99□□□□□ -0.65
LINC01561Q8N1V8 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC10.99□□□□□ -0.65
LINC01561Q8N1V8 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC10.99□□□□□ -0.65
LINC01561Q8N1V8 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC10.99□□□□□ -0.65
LINC01561Q8N1V8 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
LINC01561Q8N1V8 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
LINC01561Q8N1V8 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms