Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
ZNF546Q86UE3 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC13.63□□□□□ -0.23
ZNF546Q86UE3 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ZNF546Q86UE3 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
ZNF546Q86UE3 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC13.63□□□□□ -0.23
ZNF546Q86UE3 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
ZNF546Q86UE3 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC13.63□□□□□ -0.23
ZNF546Q86UE3 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
ZNF546Q86UE3 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ZNF546Q86UE3 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC13.63□□□□□ -0.23
ZNF546Q86UE3 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ZNF546Q86UE3 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ZNF546Q86UE3 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
ZNF546Q86UE3 FOS-208ENST00000555686 1496 ntTSL 2 BASIC13.63□□□□□ -0.23
ZNF546Q86UE3 LINC00552-201ENST00000625151 2579 ntBASIC13.63□□□□□ -0.23
ZNF546Q86UE3 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC13.63□□□□□ -0.23
ZNF546Q86UE3 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
ZNF546Q86UE3 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC13.63□□□□□ -0.23
ZNF546Q86UE3 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ZNF546Q86UE3 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
ZNF546Q86UE3 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC13.63□□□□□ -0.23
ZNF546Q86UE3 MIR648-201ENST00000385046 94 ntBASIC13.63□□□□□ -0.23
ZNF546Q86UE3 CRAT-202ENST00000393384 973 ntTSL 2 BASIC13.63□□□□□ -0.23
ZNF546Q86UE3 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC13.63□□□□□ -0.23
ZNF546Q86UE3 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC13.63□□□□□ -0.23
ZNF546Q86UE3 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
ZNF546Q86UE3 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
ZNF546Q86UE3 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC13.63□□□□□ -0.23
ZNF546Q86UE3 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC13.63□□□□□ -0.23
ZNF546Q86UE3 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC13.63□□□□□ -0.23
ZNF546Q86UE3 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
ZNF546Q86UE3 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC13.63□□□□□ -0.23
ZNF546Q86UE3 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
ZNF546Q86UE3 VPS72-207ENST00000640458 689 ntTSL 5 BASIC13.63□□□□□ -0.23
ZNF546Q86UE3 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ZNF546Q86UE3 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ZNF546Q86UE3 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
ZNF546Q86UE3 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
ZNF546Q86UE3 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC13.63□□□□□ -0.23
ZNF546Q86UE3 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
ZNF546Q86UE3 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ZNF546Q86UE3 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
ZNF546Q86UE3 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC13.63□□□□□ -0.23
ZNF546Q86UE3 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC13.63□□□□□ -0.23
ZNF546Q86UE3 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
ZNF546Q86UE3 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC13.63□□□□□ -0.23
ZNF546Q86UE3 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
ZNF546Q86UE3 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ZNF546Q86UE3 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ZNF546Q86UE3 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
ZNF546Q86UE3 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ZNF546Q86UE3 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
ZNF546Q86UE3 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC13.63□□□□□ -0.23
ZNF546Q86UE3 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC13.63□□□□□ -0.23
ZNF546Q86UE3 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
ZNF546Q86UE3 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ZNF546Q86UE3 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
ZNF546Q86UE3 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
ZNF546Q86UE3 API5-202ENST00000420461 2009 ntTSL 2 BASIC13.63□□□□□ -0.23
ZNF546Q86UE3 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC13.63□□□□□ -0.23
ZNF546Q86UE3 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ZNF546Q86UE3 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC13.62□□□□□ -0.23
ZNF546Q86UE3 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ZNF546Q86UE3 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC13.62□□□□□ -0.23
ZNF546Q86UE3 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
ZNF546Q86UE3 PTENP1-202ENST00000532280 3996 ntBASIC13.62□□□□□ -0.23
ZNF546Q86UE3 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ZNF546Q86UE3 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ZNF546Q86UE3 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
ZNF546Q86UE3 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ZNF546Q86UE3 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
ZNF546Q86UE3 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
ZNF546Q86UE3 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
ZNF546Q86UE3 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ZNF546Q86UE3 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
ZNF546Q86UE3 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
ZNF546Q86UE3 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ZNF546Q86UE3 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC13.62□□□□□ -0.23
ZNF546Q86UE3 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ZNF546Q86UE3 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC13.62□□□□□ -0.23
ZNF546Q86UE3 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
ZNF546Q86UE3 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
ZNF546Q86UE3 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ZNF546Q86UE3 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ZNF546Q86UE3 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
ZNF546Q86UE3 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
ZNF546Q86UE3 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
ZNF546Q86UE3 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
ZNF546Q86UE3 SNORA78-201ENST00000459373 127 ntBASIC13.62□□□□□ -0.23
ZNF546Q86UE3 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
ZNF546Q86UE3 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
ZNF546Q86UE3 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC13.62□□□□□ -0.23
ZNF546Q86UE3 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC13.62□□□□□ -0.23
ZNF546Q86UE3 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC13.62□□□□□ -0.23
ZNF546Q86UE3 AC141257.4-201ENST00000634557 245 ntBASIC13.62□□□□□ -0.23
ZNF546Q86UE3 AC136944.6-201ENST00000634818 245 ntBASIC13.62□□□□□ -0.23
ZNF546Q86UE3 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC13.62□□□□□ -0.23
ZNF546Q86UE3 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ZNF546Q86UE3 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
ZNF546Q86UE3 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms