Protein–RNA interactions for Protein: Q71U36

TUBA1A, Tubulin alpha-1A chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1AQ71U36 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
TUBA1AQ71U36 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TUBA1AQ71U36 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TUBA1AQ71U36 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TUBA1AQ71U36 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TUBA1AQ71U36 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
TUBA1AQ71U36 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TUBA1AQ71U36 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC15.15■□□□□ 0.02
TUBA1AQ71U36 AC010491.1-201ENST00000563101 2797 ntBASIC15.15■□□□□ 0.02
TUBA1AQ71U36 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC15.15■□□□□ 0.02
TUBA1AQ71U36 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TUBA1AQ71U36 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TUBA1AQ71U36 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TUBA1AQ71U36 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
TUBA1AQ71U36 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
TUBA1AQ71U36 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TUBA1AQ71U36 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TUBA1AQ71U36 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC15.15■□□□□ 0.02
TUBA1AQ71U36 ENSA-206ENST00000361631 725 ntTSL 2 BASIC15.15■□□□□ 0.02
TUBA1AQ71U36 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TUBA1AQ71U36 LINC00982-205ENST00000420957 435 ntBASIC15.15■□□□□ 0.02
TUBA1AQ71U36 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC15.15■□□□□ 0.02
TUBA1AQ71U36 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
TUBA1AQ71U36 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC15.15■□□□□ 0.02
TUBA1AQ71U36 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC15.15■□□□□ 0.02
TUBA1AQ71U36 AL662844.1-201ENST00000546340 181 ntBASIC15.15■□□□□ 0.02
TUBA1AQ71U36 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
TUBA1AQ71U36 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TUBA1AQ71U36 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC15.15■□□□□ 0.02
TUBA1AQ71U36 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
TUBA1AQ71U36 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
TUBA1AQ71U36 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TUBA1AQ71U36 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
TUBA1AQ71U36 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
TUBA1AQ71U36 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TUBA1AQ71U36 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TUBA1AQ71U36 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TUBA1AQ71U36 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
TUBA1AQ71U36 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
TUBA1AQ71U36 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
TUBA1AQ71U36 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TUBA1AQ71U36 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TUBA1AQ71U36 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
TUBA1AQ71U36 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
TUBA1AQ71U36 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC15.15■□□□□ 0.02
TUBA1AQ71U36 PID1-202ENST00000392054 2745 ntTSL 2 BASIC15.15■□□□□ 0.02
TUBA1AQ71U36 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TUBA1AQ71U36 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TUBA1AQ71U36 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TUBA1AQ71U36 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC15.14■□□□□ 0.01
TUBA1AQ71U36 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC15.14■□□□□ 0.01
TUBA1AQ71U36 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC15.14■□□□□ 0.01
TUBA1AQ71U36 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC15.14■□□□□ 0.01
TUBA1AQ71U36 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TUBA1AQ71U36 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC15.14■□□□□ 0.01
TUBA1AQ71U36 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
TUBA1AQ71U36 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
TUBA1AQ71U36 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
TUBA1AQ71U36 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC15.14■□□□□ 0.01
TUBA1AQ71U36 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC15.14■□□□□ 0.01
TUBA1AQ71U36 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
TUBA1AQ71U36 AC067930.6-201ENST00000623257 4947 ntBASIC15.14■□□□□ 0.01
TUBA1AQ71U36 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
TUBA1AQ71U36 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TUBA1AQ71U36 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC15.14■□□□□ 0.01
TUBA1AQ71U36 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TUBA1AQ71U36 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TUBA1AQ71U36 AC023157.3-201ENST00000619086 2088 ntBASIC15.14■□□□□ 0.01
TUBA1AQ71U36 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
TUBA1AQ71U36 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TUBA1AQ71U36 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TUBA1AQ71U36 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TUBA1AQ71U36 CENPM-204ENST00000402420 688 ntTSL 5 BASIC15.14■□□□□ 0.01
TUBA1AQ71U36 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC15.14■□□□□ 0.01
TUBA1AQ71U36 PRYP5-201ENST00000451909 266 ntBASIC15.14■□□□□ 0.01
TUBA1AQ71U36 PPIE-208ENST00000470213 927 ntTSL 3 BASIC15.14■□□□□ 0.01
TUBA1AQ71U36 RNA5SP419-201ENST00000515908 135 ntBASIC15.14■□□□□ 0.01
TUBA1AQ71U36 PENK-208ENST00000523051 772 ntTSL 5 BASIC15.14■□□□□ 0.01
TUBA1AQ71U36 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC15.14■□□□□ 0.01
TUBA1AQ71U36 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
TUBA1AQ71U36 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC15.14■□□□□ 0.01
TUBA1AQ71U36 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC15.14■□□□□ 0.01
TUBA1AQ71U36 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC15.14■□□□□ 0.01
TUBA1AQ71U36 AC139887.3-201ENST00000568585 713 ntBASIC15.14■□□□□ 0.01
TUBA1AQ71U36 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC15.14■□□□□ 0.01
TUBA1AQ71U36 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC15.14■□□□□ 0.01
TUBA1AQ71U36 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC15.14■□□□□ 0.01
TUBA1AQ71U36 AC107918.4-202ENST00000641623 219 ntBASIC15.14■□□□□ 0.01
TUBA1AQ71U36 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC15.14■□□□□ 0.01
TUBA1AQ71U36 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TUBA1AQ71U36 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC15.14■□□□□ 0.01
TUBA1AQ71U36 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
TUBA1AQ71U36 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TUBA1AQ71U36 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TUBA1AQ71U36 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TUBA1AQ71U36 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
TUBA1AQ71U36 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC15.14■□□□□ 0.01
TUBA1AQ71U36 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TUBA1AQ71U36 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TUBA1AQ71U36 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms