Protein–RNA interactions for Protein: Q6PCB7

SLC27A1, Long-chain fatty acid transport protein 1, humanhuman

Predictions only

Length 646 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC27A1Q6PCB7 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SLC27A1Q6PCB7 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC17.56■□□□□ 0.4
SLC27A1Q6PCB7 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
SLC27A1Q6PCB7 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC17.55■□□□□ 0.4
SLC27A1Q6PCB7 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SLC27A1Q6PCB7 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
SLC27A1Q6PCB7 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC17.55■□□□□ 0.4
SLC27A1Q6PCB7 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SLC27A1Q6PCB7 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SLC27A1Q6PCB7 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SLC27A1Q6PCB7 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SLC27A1Q6PCB7 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
SLC27A1Q6PCB7 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
SLC27A1Q6PCB7 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
SLC27A1Q6PCB7 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SLC27A1Q6PCB7 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC17.55■□□□□ 0.4
SLC27A1Q6PCB7 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC17.55■□□□□ 0.4
SLC27A1Q6PCB7 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC17.55■□□□□ 0.4
SLC27A1Q6PCB7 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SLC27A1Q6PCB7 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC17.55■□□□□ 0.4
SLC27A1Q6PCB7 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC17.55■□□□□ 0.4
SLC27A1Q6PCB7 AC135586.1-201ENST00000539323 574 ntBASIC17.55■□□□□ 0.4
SLC27A1Q6PCB7 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC17.55■□□□□ 0.4
SLC27A1Q6PCB7 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
SLC27A1Q6PCB7 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC17.55■□□□□ 0.4
SLC27A1Q6PCB7 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC17.55■□□□□ 0.4
SLC27A1Q6PCB7 AC004233.3-201ENST00000607794 1269 ntBASIC17.55■□□□□ 0.4
SLC27A1Q6PCB7 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC17.55■□□□□ 0.4
SLC27A1Q6PCB7 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC17.55■□□□□ 0.4
SLC27A1Q6PCB7 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC17.55■□□□□ 0.4
SLC27A1Q6PCB7 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
SLC27A1Q6PCB7 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SLC27A1Q6PCB7 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SLC27A1Q6PCB7 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SLC27A1Q6PCB7 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC17.55■□□□□ 0.4
SLC27A1Q6PCB7 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SLC27A1Q6PCB7 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SLC27A1Q6PCB7 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
SLC27A1Q6PCB7 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SLC27A1Q6PCB7 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SLC27A1Q6PCB7 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SLC27A1Q6PCB7 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
SLC27A1Q6PCB7 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC17.55■□□□□ 0.4
SLC27A1Q6PCB7 AL691432.1-201ENST00000596308 1422 ntBASIC17.55■□□□□ 0.4
SLC27A1Q6PCB7 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC17.55■□□□□ 0.4
SLC27A1Q6PCB7 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SLC27A1Q6PCB7 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SLC27A1Q6PCB7 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC17.54■□□□□ 0.4
SLC27A1Q6PCB7 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC17.54■□□□□ 0.4
SLC27A1Q6PCB7 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC17.54■□□□□ 0.4
SLC27A1Q6PCB7 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SLC27A1Q6PCB7 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SLC27A1Q6PCB7 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
SLC27A1Q6PCB7 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SLC27A1Q6PCB7 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC17.54■□□□□ 0.4
SLC27A1Q6PCB7 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SLC27A1Q6PCB7 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC17.54■□□□□ 0.4
SLC27A1Q6PCB7 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SLC27A1Q6PCB7 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SLC27A1Q6PCB7 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SLC27A1Q6PCB7 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SLC27A1Q6PCB7 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SLC27A1Q6PCB7 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SLC27A1Q6PCB7 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC17.54■□□□□ 0.4
SLC27A1Q6PCB7 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SLC27A1Q6PCB7 AC004987.2-201ENST00000395959 1148 ntBASIC17.54■□□□□ 0.4
SLC27A1Q6PCB7 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC17.54■□□□□ 0.4
SLC27A1Q6PCB7 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SLC27A1Q6PCB7 PIN1P1-201ENST00000412108 996 ntBASIC17.54■□□□□ 0.4
SLC27A1Q6PCB7 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC17.54■□□□□ 0.4
SLC27A1Q6PCB7 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC17.54■□□□□ 0.4
SLC27A1Q6PCB7 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC17.54■□□□□ 0.4
SLC27A1Q6PCB7 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC17.54■□□□□ 0.4
SLC27A1Q6PCB7 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC17.54■□□□□ 0.4
SLC27A1Q6PCB7 AC044860.1-202ENST00000559481 777 ntBASIC17.54■□□□□ 0.4
SLC27A1Q6PCB7 AC243562.2-201ENST00000561247 970 ntBASIC17.54■□□□□ 0.4
SLC27A1Q6PCB7 COX11-202ENST00000571584 1108 ntTSL 2 BASIC17.54■□□□□ 0.4
SLC27A1Q6PCB7 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SLC27A1Q6PCB7 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC17.54■□□□□ 0.4
SLC27A1Q6PCB7 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
SLC27A1Q6PCB7 AC009053.2-201ENST00000563701 2365 ntBASIC17.54■□□□□ 0.4
SLC27A1Q6PCB7 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SLC27A1Q6PCB7 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
SLC27A1Q6PCB7 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SLC27A1Q6PCB7 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
SLC27A1Q6PCB7 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SLC27A1Q6PCB7 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SLC27A1Q6PCB7 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SLC27A1Q6PCB7 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC17.54■□□□□ 0.4
SLC27A1Q6PCB7 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
SLC27A1Q6PCB7 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC17.53■□□□□ 0.4
SLC27A1Q6PCB7 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SLC27A1Q6PCB7 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
SLC27A1Q6PCB7 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC17.53■□□□□ 0.4
SLC27A1Q6PCB7 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC17.53■□□□□ 0.4
SLC27A1Q6PCB7 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
SLC27A1Q6PCB7 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC17.53■□□□□ 0.4
SLC27A1Q6PCB7 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SLC27A1Q6PCB7 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC17.53■□□□□ 0.4
SLC27A1Q6PCB7 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms