Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC16.21■□□□□ 0.19
ZNF549Q6P9A3 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC16.21■□□□□ 0.19
ZNF549Q6P9A3 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
ZNF549Q6P9A3 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC16.21■□□□□ 0.19
ZNF549Q6P9A3 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ZNF549Q6P9A3 AC069224.1-201ENST00000566372 1715 ntBASIC16.21■□□□□ 0.19
ZNF549Q6P9A3 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ZNF549Q6P9A3 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
ZNF549Q6P9A3 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
ZNF549Q6P9A3 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
ZNF549Q6P9A3 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.18
ZNF549Q6P9A3 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
ZNF549Q6P9A3 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ZNF549Q6P9A3 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC16.2■□□□□ 0.18
ZNF549Q6P9A3 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
ZNF549Q6P9A3 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC16.2■□□□□ 0.18
ZNF549Q6P9A3 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ZNF549Q6P9A3 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
ZNF549Q6P9A3 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ZNF549Q6P9A3 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
ZNF549Q6P9A3 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC16.2■□□□□ 0.18
ZNF549Q6P9A3 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
ZNF549Q6P9A3 LTF-203ENST00000426532 2494 ntTSL 2 BASIC16.2■□□□□ 0.18
ZNF549Q6P9A3 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ZNF549Q6P9A3 ACE-204ENST00000428043 5120 ntTSL 2 BASIC16.2■□□□□ 0.18
ZNF549Q6P9A3 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ZNF549Q6P9A3 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ZNF549Q6P9A3 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC16.2■□□□□ 0.18
ZNF549Q6P9A3 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ZNF549Q6P9A3 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ZNF549Q6P9A3 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC16.2■□□□□ 0.18
ZNF549Q6P9A3 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ZNF549Q6P9A3 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
ZNF549Q6P9A3 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC16.2■□□□□ 0.18
ZNF549Q6P9A3 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
ZNF549Q6P9A3 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ZNF549Q6P9A3 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC16.2■□□□□ 0.18
ZNF549Q6P9A3 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
ZNF549Q6P9A3 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC16.2■□□□□ 0.18
ZNF549Q6P9A3 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC16.2■□□□□ 0.18
ZNF549Q6P9A3 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
ZNF549Q6P9A3 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC16.2■□□□□ 0.18
ZNF549Q6P9A3 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
ZNF549Q6P9A3 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
ZNF549Q6P9A3 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ZNF549Q6P9A3 AL139384.1-201ENST00000612143 3047 ntBASIC16.2■□□□□ 0.18
ZNF549Q6P9A3 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
ZNF549Q6P9A3 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
ZNF549Q6P9A3 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ZNF549Q6P9A3 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
ZNF549Q6P9A3 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC16.19■□□□□ 0.18
ZNF549Q6P9A3 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ZNF549Q6P9A3 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC16.19■□□□□ 0.18
ZNF549Q6P9A3 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
ZNF549Q6P9A3 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ZNF549Q6P9A3 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC16.19■□□□□ 0.18
ZNF549Q6P9A3 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
ZNF549Q6P9A3 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC16.19■□□□□ 0.18
ZNF549Q6P9A3 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ZNF549Q6P9A3 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
ZNF549Q6P9A3 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC16.19■□□□□ 0.18
ZNF549Q6P9A3 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ZNF549Q6P9A3 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC16.19■□□□□ 0.18
ZNF549Q6P9A3 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC16.19■□□□□ 0.18
ZNF549Q6P9A3 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ZNF549Q6P9A3 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ZNF549Q6P9A3 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ZNF549Q6P9A3 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
ZNF549Q6P9A3 MIR648-201ENST00000385046 94 ntBASIC16.19■□□□□ 0.18
ZNF549Q6P9A3 AC023274.1-201ENST00000418278 595 ntBASIC16.19■□□□□ 0.18
ZNF549Q6P9A3 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ZNF549Q6P9A3 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
ZNF549Q6P9A3 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC16.19■□□□□ 0.18
ZNF549Q6P9A3 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC16.19■□□□□ 0.18
ZNF549Q6P9A3 AL138918.1-201ENST00000568306 659 ntBASIC16.19■□□□□ 0.18
ZNF549Q6P9A3 COX5A-206ENST00000568783 571 ntTSL 3 BASIC16.19■□□□□ 0.18
ZNF549Q6P9A3 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ZNF549Q6P9A3 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC16.19■□□□□ 0.18
ZNF549Q6P9A3 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC16.19■□□□□ 0.18
ZNF549Q6P9A3 CAND2-206ENST00000626378 333 ntTSL 5 BASIC16.19■□□□□ 0.18
ZNF549Q6P9A3 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
ZNF549Q6P9A3 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ZNF549Q6P9A3 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
ZNF549Q6P9A3 F11R-206ENST00000621309 4770 ntTSL 5 BASIC16.19■□□□□ 0.18
ZNF549Q6P9A3 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC16.19■□□□□ 0.18
ZNF549Q6P9A3 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ZNF549Q6P9A3 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
ZNF549Q6P9A3 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ZNF549Q6P9A3 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
ZNF549Q6P9A3 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC16.19■□□□□ 0.18
ZNF549Q6P9A3 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ZNF549Q6P9A3 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
ZNF549Q6P9A3 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC16.19■□□□□ 0.18
ZNF549Q6P9A3 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC16.19■□□□□ 0.18
ZNF549Q6P9A3 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
ZNF549Q6P9A3 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
ZNF549Q6P9A3 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC16.18■□□□□ 0.18
ZNF549Q6P9A3 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ZNF549Q6P9A3 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ZNF549Q6P9A3 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms