Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC17.15■□□□□ 0.34
RNF43Q68DV7 AC012645.4-201ENST00000610691 1061 ntBASIC17.15■□□□□ 0.34
RNF43Q68DV7 AC009093.7-201ENST00000623853 1223 ntBASIC17.15■□□□□ 0.34
RNF43Q68DV7 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RNF43Q68DV7 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RNF43Q68DV7 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RNF43Q68DV7 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
RNF43Q68DV7 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
RNF43Q68DV7 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
RNF43Q68DV7 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
RNF43Q68DV7 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RNF43Q68DV7 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
RNF43Q68DV7 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
RNF43Q68DV7 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC17.15■□□□□ 0.34
RNF43Q68DV7 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
RNF43Q68DV7 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC17.15■□□□□ 0.34
RNF43Q68DV7 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC17.15■□□□□ 0.34
RNF43Q68DV7 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RNF43Q68DV7 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
RNF43Q68DV7 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
RNF43Q68DV7 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
RNF43Q68DV7 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
RNF43Q68DV7 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC17.14■□□□□ 0.33
RNF43Q68DV7 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RNF43Q68DV7 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC17.14■□□□□ 0.33
RNF43Q68DV7 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
RNF43Q68DV7 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RNF43Q68DV7 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC17.14■□□□□ 0.33
RNF43Q68DV7 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC17.14■□□□□ 0.33
RNF43Q68DV7 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
RNF43Q68DV7 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RNF43Q68DV7 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RNF43Q68DV7 KLK8-202ENST00000320838 456 ntTSL 5 BASIC17.14■□□□□ 0.33
RNF43Q68DV7 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RNF43Q68DV7 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RNF43Q68DV7 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC17.14■□□□□ 0.33
RNF43Q68DV7 SPCS2P4-201ENST00000436160 681 ntBASIC17.14■□□□□ 0.33
RNF43Q68DV7 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC17.14■□□□□ 0.33
RNF43Q68DV7 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC17.14■□□□□ 0.33
RNF43Q68DV7 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC17.14■□□□□ 0.33
RNF43Q68DV7 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
RNF43Q68DV7 SSH2-211ENST00000590153 570 ntTSL 4 BASIC17.14■□□□□ 0.33
RNF43Q68DV7 AC021097.1-201ENST00000607902 574 ntBASIC17.14■□□□□ 0.33
RNF43Q68DV7 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC17.14■□□□□ 0.33
RNF43Q68DV7 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC17.14■□□□□ 0.33
RNF43Q68DV7 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RNF43Q68DV7 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
RNF43Q68DV7 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RNF43Q68DV7 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RNF43Q68DV7 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
RNF43Q68DV7 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RNF43Q68DV7 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RNF43Q68DV7 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RNF43Q68DV7 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC17.14■□□□□ 0.33
RNF43Q68DV7 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC17.14■□□□□ 0.33
RNF43Q68DV7 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RNF43Q68DV7 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RNF43Q68DV7 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
RNF43Q68DV7 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RNF43Q68DV7 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RNF43Q68DV7 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RNF43Q68DV7 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RNF43Q68DV7 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RNF43Q68DV7 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RNF43Q68DV7 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RNF43Q68DV7 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RNF43Q68DV7 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RNF43Q68DV7 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC17.13■□□□□ 0.33
RNF43Q68DV7 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
RNF43Q68DV7 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RNF43Q68DV7 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC17.13■□□□□ 0.33
RNF43Q68DV7 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
RNF43Q68DV7 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RNF43Q68DV7 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RNF43Q68DV7 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
RNF43Q68DV7 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RNF43Q68DV7 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC17.13■□□□□ 0.33
RNF43Q68DV7 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RNF43Q68DV7 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RNF43Q68DV7 SPDYE11-202ENST00000450699 704 ntBASIC17.13■□□□□ 0.33
RNF43Q68DV7 TIMM8BP1-201ENST00000452384 211 ntBASIC17.13■□□□□ 0.33
RNF43Q68DV7 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RNF43Q68DV7 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC17.13■□□□□ 0.33
RNF43Q68DV7 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC17.13■□□□□ 0.33
RNF43Q68DV7 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC17.13■□□□□ 0.33
RNF43Q68DV7 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC17.13■□□□□ 0.33
RNF43Q68DV7 SPDYE9P-201ENST00000570642 692 ntBASIC17.13■□□□□ 0.33
RNF43Q68DV7 SPDYE10P-202ENST00000612005 668 ntBASIC17.13■□□□□ 0.33
RNF43Q68DV7 SPDYE8P-202ENST00000612377 668 ntBASIC17.13■□□□□ 0.33
RNF43Q68DV7 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC17.13■□□□□ 0.33
RNF43Q68DV7 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC17.13■□□□□ 0.33
RNF43Q68DV7 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
RNF43Q68DV7 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
RNF43Q68DV7 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
RNF43Q68DV7 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
RNF43Q68DV7 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RNF43Q68DV7 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RNF43Q68DV7 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC17.13■□□□□ 0.33
RNF43Q68DV7 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
RNF43Q68DV7 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms