Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TTC39BQ5VTQ0 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC17.03■□□□□ 0.32
TTC39BQ5VTQ0 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC17.03■□□□□ 0.32
TTC39BQ5VTQ0 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC17.03■□□□□ 0.32
TTC39BQ5VTQ0 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC17.03■□□□□ 0.32
TTC39BQ5VTQ0 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC17.03■□□□□ 0.32
TTC39BQ5VTQ0 AC105233.2-201ENST00000523697 349 ntBASIC17.03■□□□□ 0.32
TTC39BQ5VTQ0 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC17.03■□□□□ 0.32
TTC39BQ5VTQ0 AF228730.5-201ENST00000530288 346 ntBASIC17.03■□□□□ 0.32
TTC39BQ5VTQ0 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC17.03■□□□□ 0.32
TTC39BQ5VTQ0 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC17.03■□□□□ 0.32
TTC39BQ5VTQ0 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC17.03■□□□□ 0.32
TTC39BQ5VTQ0 AC027612.4-201ENST00000605371 583 ntBASIC17.03■□□□□ 0.32
TTC39BQ5VTQ0 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC17.03■□□□□ 0.32
TTC39BQ5VTQ0 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC17.03■□□□□ 0.32
TTC39BQ5VTQ0 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC17.03■□□□□ 0.32
TTC39BQ5VTQ0 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
TTC39BQ5VTQ0 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TTC39BQ5VTQ0 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TTC39BQ5VTQ0 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TTC39BQ5VTQ0 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
TTC39BQ5VTQ0 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
TTC39BQ5VTQ0 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC17.03■□□□□ 0.32
TTC39BQ5VTQ0 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TTC39BQ5VTQ0 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
TTC39BQ5VTQ0 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TTC39BQ5VTQ0 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC17.03■□□□□ 0.32
TTC39BQ5VTQ0 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
TTC39BQ5VTQ0 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC17.03■□□□□ 0.32
TTC39BQ5VTQ0 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TTC39BQ5VTQ0 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
TTC39BQ5VTQ0 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TTC39BQ5VTQ0 GCK-202ENST00000345378 2421 ntTSL 2 BASIC17.02■□□□□ 0.32
TTC39BQ5VTQ0 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC17.02■□□□□ 0.32
TTC39BQ5VTQ0 MTHFR-217ENST00000641820 1569 ntBASIC17.02■□□□□ 0.32
TTC39BQ5VTQ0 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TTC39BQ5VTQ0 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC17.02■□□□□ 0.32
TTC39BQ5VTQ0 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
TTC39BQ5VTQ0 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TTC39BQ5VTQ0 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC17.02■□□□□ 0.32
TTC39BQ5VTQ0 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TTC39BQ5VTQ0 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TTC39BQ5VTQ0 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
TTC39BQ5VTQ0 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
TTC39BQ5VTQ0 AL031731.1-201ENST00000642131 2094 ntBASIC17.02■□□□□ 0.32
TTC39BQ5VTQ0 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC17.02■□□□□ 0.32
TTC39BQ5VTQ0 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC17.02■□□□□ 0.32
TTC39BQ5VTQ0 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TTC39BQ5VTQ0 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TTC39BQ5VTQ0 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC17.02■□□□□ 0.32
TTC39BQ5VTQ0 KRT18P32-201ENST00000424695 1287 ntBASIC17.02■□□□□ 0.32
TTC39BQ5VTQ0 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC17.02■□□□□ 0.32
TTC39BQ5VTQ0 AC069335.1-201ENST00000489972 472 ntBASIC17.02■□□□□ 0.32
TTC39BQ5VTQ0 PRYP6-201ENST00000514804 343 ntBASIC17.02■□□□□ 0.32
TTC39BQ5VTQ0 LINC01225-203ENST00000563550 1244 ntBASIC17.02■□□□□ 0.32
TTC39BQ5VTQ0 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC17.02■□□□□ 0.32
TTC39BQ5VTQ0 AC027307.2-201ENST00000591252 911 ntBASIC17.02■□□□□ 0.32
TTC39BQ5VTQ0 AC073389.1-201ENST00000595595 795 ntBASIC17.02■□□□□ 0.32
TTC39BQ5VTQ0 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC17.02■□□□□ 0.32
TTC39BQ5VTQ0 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.32
TTC39BQ5VTQ0 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TTC39BQ5VTQ0 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC17.02■□□□□ 0.32
TTC39BQ5VTQ0 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC17.02■□□□□ 0.32
TTC39BQ5VTQ0 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
TTC39BQ5VTQ0 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
TTC39BQ5VTQ0 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
TTC39BQ5VTQ0 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
TTC39BQ5VTQ0 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC17.02■□□□□ 0.31
TTC39BQ5VTQ0 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
TTC39BQ5VTQ0 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
TTC39BQ5VTQ0 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
TTC39BQ5VTQ0 FUK-207ENST00000571514 3054 ntTSL 2 BASIC17.02■□□□□ 0.31
TTC39BQ5VTQ0 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
TTC39BQ5VTQ0 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC17.01■□□□□ 0.31
TTC39BQ5VTQ0 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TTC39BQ5VTQ0 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC17.01■□□□□ 0.31
TTC39BQ5VTQ0 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
TTC39BQ5VTQ0 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC17.01■□□□□ 0.31
TTC39BQ5VTQ0 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TTC39BQ5VTQ0 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC17.01■□□□□ 0.31
TTC39BQ5VTQ0 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TTC39BQ5VTQ0 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
TTC39BQ5VTQ0 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC17.01■□□□□ 0.31
TTC39BQ5VTQ0 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC17.01■□□□□ 0.31
TTC39BQ5VTQ0 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TTC39BQ5VTQ0 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC17.01■□□□□ 0.31
TTC39BQ5VTQ0 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
TTC39BQ5VTQ0 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TTC39BQ5VTQ0 PTMS-202ENST00000389462 773 ntTSL 2 BASIC17.01■□□□□ 0.31
TTC39BQ5VTQ0 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TTC39BQ5VTQ0 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC17.01■□□□□ 0.31
TTC39BQ5VTQ0 VMO1-203ENST00000416307 712 ntTSL 2 BASIC17.01■□□□□ 0.31
TTC39BQ5VTQ0 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC17.01■□□□□ 0.31
TTC39BQ5VTQ0 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC17.01■□□□□ 0.31
TTC39BQ5VTQ0 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC17.01■□□□□ 0.31
TTC39BQ5VTQ0 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC17.01■□□□□ 0.31
TTC39BQ5VTQ0 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TTC39BQ5VTQ0 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
TTC39BQ5VTQ0 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TTC39BQ5VTQ0 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms