Protein–RNA interactions for Protein: Q01850

CDR2, Cerebellar degeneration-related protein 2, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2Q01850 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
CDR2Q01850 AC069224.1-201ENST00000566372 1715 ntBASIC17.42■□□□□ 0.38
CDR2Q01850 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CDR2Q01850 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC17.42■□□□□ 0.38
CDR2Q01850 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
CDR2Q01850 AC002056.1-201ENST00000395613 760 ntBASIC17.42■□□□□ 0.38
CDR2Q01850 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CDR2Q01850 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC17.42■□□□□ 0.38
CDR2Q01850 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC17.42■□□□□ 0.38
CDR2Q01850 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC17.42■□□□□ 0.38
CDR2Q01850 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CDR2Q01850 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC17.42■□□□□ 0.38
CDR2Q01850 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDR2Q01850 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDR2Q01850 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC17.42■□□□□ 0.38
CDR2Q01850 AC112504.1-201ENST00000623415 1841 ntBASIC17.42■□□□□ 0.38
CDR2Q01850 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDR2Q01850 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
CDR2Q01850 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
CDR2Q01850 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC17.42■□□□□ 0.38
CDR2Q01850 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDR2Q01850 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
CDR2Q01850 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CDR2Q01850 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDR2Q01850 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC17.41■□□□□ 0.38
CDR2Q01850 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CDR2Q01850 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDR2Q01850 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC17.41■□□□□ 0.38
CDR2Q01850 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDR2Q01850 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDR2Q01850 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC17.41■□□□□ 0.38
CDR2Q01850 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDR2Q01850 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CDR2Q01850 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
CDR2Q01850 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC17.41■□□□□ 0.38
CDR2Q01850 AC112191.1-201ENST00000523689 701 ntBASIC17.41■□□□□ 0.38
CDR2Q01850 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC17.41■□□□□ 0.38
CDR2Q01850 AC099522.2-201ENST00000607001 744 ntBASIC17.41■□□□□ 0.38
CDR2Q01850 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
CDR2Q01850 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CDR2Q01850 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDR2Q01850 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDR2Q01850 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
CDR2Q01850 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDR2Q01850 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDR2Q01850 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDR2Q01850 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC17.41■□□□□ 0.38
CDR2Q01850 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CDR2Q01850 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDR2Q01850 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDR2Q01850 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDR2Q01850 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDR2Q01850 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDR2Q01850 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDR2Q01850 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC17.4■□□□□ 0.38
CDR2Q01850 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
CDR2Q01850 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CDR2Q01850 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
CDR2Q01850 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC17.4■□□□□ 0.38
CDR2Q01850 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CDR2Q01850 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDR2Q01850 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDR2Q01850 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDR2Q01850 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CDR2Q01850 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
CDR2Q01850 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC17.4■□□□□ 0.38
CDR2Q01850 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDR2Q01850 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CDR2Q01850 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC17.4■□□□□ 0.38
CDR2Q01850 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC17.4■□□□□ 0.38
CDR2Q01850 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDR2Q01850 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
CDR2Q01850 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC17.4■□□□□ 0.38
CDR2Q01850 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC17.4■□□□□ 0.38
CDR2Q01850 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC17.4■□□□□ 0.38
CDR2Q01850 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDR2Q01850 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CDR2Q01850 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDR2Q01850 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDR2Q01850 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
CDR2Q01850 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDR2Q01850 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDR2Q01850 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDR2Q01850 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CDR2Q01850 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDR2Q01850 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.38
CDR2Q01850 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC17.39■□□□□ 0.38
CDR2Q01850 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
CDR2Q01850 FUK-207ENST00000571514 3054 ntTSL 2 BASIC17.39■□□□□ 0.38
CDR2Q01850 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
CDR2Q01850 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC17.39■□□□□ 0.38
CDR2Q01850 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDR2Q01850 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDR2Q01850 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
CDR2Q01850 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDR2Q01850 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDR2Q01850 AL589702.1-201ENST00000641229 1509 ntBASIC17.39■□□□□ 0.37
CDR2Q01850 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CDR2Q01850 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDR2Q01850 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 66 ms