Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC18.38■□□□□ 0.53
TPM4P67936 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC18.38■□□□□ 0.53
TPM4P67936 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC18.38■□□□□ 0.53
TPM4P67936 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TPM4P67936 AC073347.1-201ENST00000421633 2643 ntBASIC18.38■□□□□ 0.53
TPM4P67936 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC18.38■□□□□ 0.53
TPM4P67936 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
TPM4P67936 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TPM4P67936 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TPM4P67936 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC18.38■□□□□ 0.53
TPM4P67936 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TPM4P67936 AL353732.1-201ENST00000569618 1459 ntBASIC18.38■□□□□ 0.53
TPM4P67936 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC18.38■□□□□ 0.53
TPM4P67936 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
TPM4P67936 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC18.38■□□□□ 0.53
TPM4P67936 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
TPM4P67936 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TPM4P67936 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC18.38■□□□□ 0.53
TPM4P67936 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TPM4P67936 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TPM4P67936 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TPM4P67936 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
TPM4P67936 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TPM4P67936 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TPM4P67936 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC18.37■□□□□ 0.53
TPM4P67936 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
TPM4P67936 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC18.37■□□□□ 0.53
TPM4P67936 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC18.37■□□□□ 0.53
TPM4P67936 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC18.37■□□□□ 0.53
TPM4P67936 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
TPM4P67936 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TPM4P67936 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC18.37■□□□□ 0.53
TPM4P67936 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
TPM4P67936 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TPM4P67936 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC18.37■□□□□ 0.53
TPM4P67936 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TPM4P67936 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC18.37■□□□□ 0.53
TPM4P67936 REXO1L3P-201ENST00000622202 1288 ntBASIC18.37■□□□□ 0.53
TPM4P67936 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
TPM4P67936 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
TPM4P67936 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC18.37■□□□□ 0.53
TPM4P67936 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
TPM4P67936 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
TPM4P67936 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
TPM4P67936 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC18.37■□□□□ 0.53
TPM4P67936 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC18.37■□□□□ 0.53
TPM4P67936 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TPM4P67936 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC18.37■□□□□ 0.53
TPM4P67936 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TPM4P67936 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
TPM4P67936 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
TPM4P67936 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
TPM4P67936 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TPM4P67936 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
TPM4P67936 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
TPM4P67936 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TPM4P67936 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TPM4P67936 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TPM4P67936 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TPM4P67936 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC18.36■□□□□ 0.53
TPM4P67936 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TPM4P67936 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TPM4P67936 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TPM4P67936 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TPM4P67936 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
TPM4P67936 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TPM4P67936 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TPM4P67936 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TPM4P67936 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
TPM4P67936 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TPM4P67936 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
TPM4P67936 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TPM4P67936 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TPM4P67936 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC18.36■□□□□ 0.53
TPM4P67936 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC18.36■□□□□ 0.53
TPM4P67936 BET1L-206ENST00000486280 665 ntTSL 3 BASIC18.36■□□□□ 0.53
TPM4P67936 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TPM4P67936 FAM86EP-206ENST00000510506 987 ntBASIC18.36■□□□□ 0.53
TPM4P67936 AC087641.1-201ENST00000557561 1021 ntBASIC18.36■□□□□ 0.53
TPM4P67936 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC18.36■□□□□ 0.53
TPM4P67936 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC18.36■□□□□ 0.53
TPM4P67936 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
TPM4P67936 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TPM4P67936 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TPM4P67936 AL139288.1-201ENST00000623748 933 ntBASIC18.36■□□□□ 0.53
TPM4P67936 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC18.36■□□□□ 0.53
TPM4P67936 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC18.36■□□□□ 0.53
TPM4P67936 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
TPM4P67936 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC18.36■□□□□ 0.53
TPM4P67936 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TPM4P67936 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
TPM4P67936 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
TPM4P67936 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
TPM4P67936 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC18.36■□□□□ 0.53
TPM4P67936 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
TPM4P67936 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TPM4P67936 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TPM4P67936 PI4KAP1-204ENST00000612579 1703 ntBASIC18.35■□□□□ 0.53
TPM4P67936 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC18.35■□□□□ 0.53
TPM4P67936 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms