Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC15.2■□□□□ 0.02
PER3P56645 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC15.2■□□□□ 0.02
PER3P56645 AC105917.1-201ENST00000506637 2539 ntBASIC15.2■□□□□ 0.02
PER3P56645 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PER3P56645 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PER3P56645 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PER3P56645 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
PER3P56645 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PER3P56645 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC15.2■□□□□ 0.02
PER3P56645 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PER3P56645 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PER3P56645 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PER3P56645 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PER3P56645 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC15.2■□□□□ 0.02
PER3P56645 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC15.2■□□□□ 0.02
PER3P56645 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC15.2■□□□□ 0.02
PER3P56645 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
PER3P56645 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
PER3P56645 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC15.2■□□□□ 0.02
PER3P56645 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC15.2■□□□□ 0.02
PER3P56645 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
PER3P56645 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC15.19■□□□□ 0.02
PER3P56645 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PER3P56645 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PER3P56645 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
PER3P56645 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
PER3P56645 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PER3P56645 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PER3P56645 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC15.19■□□□□ 0.02
PER3P56645 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PER3P56645 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC15.19■□□□□ 0.02
PER3P56645 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC15.19■□□□□ 0.02
PER3P56645 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC15.19■□□□□ 0.02
PER3P56645 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PER3P56645 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PER3P56645 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC15.19■□□□□ 0.02
PER3P56645 RBPMS2P1-201ENST00000437762 623 ntBASIC15.19■□□□□ 0.02
PER3P56645 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC15.19■□□□□ 0.02
PER3P56645 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PER3P56645 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
PER3P56645 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PER3P56645 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC15.19■□□□□ 0.02
PER3P56645 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PER3P56645 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PER3P56645 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC15.19■□□□□ 0.02
PER3P56645 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
PER3P56645 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PER3P56645 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC15.19■□□□□ 0.02
PER3P56645 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
PER3P56645 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PER3P56645 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC15.19■□□□□ 0.02
PER3P56645 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PER3P56645 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PER3P56645 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PER3P56645 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
PER3P56645 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
PER3P56645 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC15.19■□□□□ 0.02
PER3P56645 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
PER3P56645 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PER3P56645 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PER3P56645 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PER3P56645 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PER3P56645 C1R-202ENST00000536053 2347 ntTSL 2 BASIC15.18■□□□□ 0.02
PER3P56645 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PER3P56645 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PER3P56645 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
PER3P56645 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PER3P56645 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PER3P56645 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PER3P56645 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PER3P56645 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PER3P56645 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC15.18■□□□□ 0.02
PER3P56645 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PER3P56645 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PER3P56645 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PER3P56645 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PER3P56645 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PER3P56645 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PER3P56645 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC15.18■□□□□ 0.02
PER3P56645 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC15.18■□□□□ 0.02
PER3P56645 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC15.18■□□□□ 0.02
PER3P56645 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC15.18■□□□□ 0.02
PER3P56645 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC15.18■□□□□ 0.02
PER3P56645 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC15.18■□□□□ 0.02
PER3P56645 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC15.18■□□□□ 0.02
PER3P56645 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC15.18■□□□□ 0.02
PER3P56645 KRT8P23-201ENST00000560090 1207 ntBASIC15.18■□□□□ 0.02
PER3P56645 AL135744.1-201ENST00000565098 629 ntBASIC15.18■□□□□ 0.02
PER3P56645 LINC02560-201ENST00000596379 459 ntBASIC15.18■□□□□ 0.02
PER3P56645 AC099522.2-201ENST00000607001 744 ntBASIC15.18■□□□□ 0.02
PER3P56645 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC15.18■□□□□ 0.02
PER3P56645 AL390754.1-201ENST00000619088 582 ntBASIC15.18■□□□□ 0.02
PER3P56645 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
PER3P56645 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
PER3P56645 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PER3P56645 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
PER3P56645 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PER3P56645 TSPY26P-202ENST00000565928 3884 ntBASIC15.18■□□□□ 0.02
PER3P56645 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
PER3P56645 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC15.18■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms