Protein–RNA interactions for Protein: P51148

RAB5C, Ras-related protein Rab-5C, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5CP51148 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RAB5CP51148 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
RAB5CP51148 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
RAB5CP51148 SATB2-201ENST00000260926 5318 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RAB5CP51148 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
RAB5CP51148 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
RAB5CP51148 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC13.19□□□□□ -0.3
RAB5CP51148 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RAB5CP51148 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC13.18□□□□□ -0.3
RAB5CP51148 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
RAB5CP51148 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
RAB5CP51148 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
RAB5CP51148 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
RAB5CP51148 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC13.18□□□□□ -0.3
RAB5CP51148 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
RAB5CP51148 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC13.18□□□□□ -0.3
RAB5CP51148 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RAB5CP51148 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
RAB5CP51148 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
RAB5CP51148 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RAB5CP51148 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RAB5CP51148 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RAB5CP51148 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC13.18□□□□□ -0.3
RAB5CP51148 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC13.18□□□□□ -0.3
RAB5CP51148 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RAB5CP51148 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
RAB5CP51148 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
RAB5CP51148 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
RAB5CP51148 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC13.18□□□□□ -0.3
RAB5CP51148 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC13.18□□□□□ -0.3
RAB5CP51148 AC034232.1-201ENST00000506026 1064 ntBASIC13.18□□□□□ -0.3
RAB5CP51148 AC090192.1-201ENST00000517740 490 ntBASIC13.18□□□□□ -0.3
RAB5CP51148 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
RAB5CP51148 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
RAB5CP51148 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC13.18□□□□□ -0.3
RAB5CP51148 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
RAB5CP51148 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC13.18□□□□□ -0.3
RAB5CP51148 AC142086.2-201ENST00000569753 217 ntBASIC13.18□□□□□ -0.3
RAB5CP51148 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC13.18□□□□□ -0.3
RAB5CP51148 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC13.18□□□□□ -0.3
RAB5CP51148 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC13.18□□□□□ -0.3
RAB5CP51148 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
RAB5CP51148 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
RAB5CP51148 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
RAB5CP51148 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
RAB5CP51148 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
RAB5CP51148 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
RAB5CP51148 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
RAB5CP51148 PCGF3-213ENST00000620529 1899 ntBASIC13.18□□□□□ -0.3
RAB5CP51148 AC107918.4-201ENST00000641966 3141 ntBASIC13.18□□□□□ -0.3
RAB5CP51148 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC13.18□□□□□ -0.3
RAB5CP51148 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
RAB5CP51148 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
RAB5CP51148 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC13.18□□□□□ -0.3
RAB5CP51148 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RAB5CP51148 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RAB5CP51148 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC13.18□□□□□ -0.3
RAB5CP51148 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC13.18□□□□□ -0.3
RAB5CP51148 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC13.18□□□□□ -0.3
RAB5CP51148 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
RAB5CP51148 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
RAB5CP51148 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
RAB5CP51148 RER1-203ENST00000378513 3000 ntTSL 3 BASIC13.18□□□□□ -0.3
RAB5CP51148 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RAB5CP51148 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RAB5CP51148 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC13.17□□□□□ -0.3
RAB5CP51148 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC13.17□□□□□ -0.3
RAB5CP51148 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC13.17□□□□□ -0.3
RAB5CP51148 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RAB5CP51148 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC13.17□□□□□ -0.3
RAB5CP51148 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
RAB5CP51148 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC13.17□□□□□ -0.3
RAB5CP51148 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC13.17□□□□□ -0.3
RAB5CP51148 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RAB5CP51148 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RAB5CP51148 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
RAB5CP51148 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RAB5CP51148 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC13.17□□□□□ -0.3
RAB5CP51148 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RAB5CP51148 AC003669.1-201ENST00000334569 611 ntBASIC13.17□□□□□ -0.3
RAB5CP51148 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
RAB5CP51148 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC13.17□□□□□ -0.3
RAB5CP51148 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC13.17□□□□□ -0.3
RAB5CP51148 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC13.17□□□□□ -0.3
RAB5CP51148 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
RAB5CP51148 NAA38-203ENST00000575071 553 ntTSL 2 BASIC13.17□□□□□ -0.3
RAB5CP51148 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
RAB5CP51148 CICP20-201ENST00000443330 2801 ntBASIC13.17□□□□□ -0.3
RAB5CP51148 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
RAB5CP51148 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
RAB5CP51148 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
RAB5CP51148 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC13.17□□□□□ -0.3
RAB5CP51148 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RAB5CP51148 CCBE1-201ENST00000398179 5979 ntTSL 5 BASIC13.17□□□□□ -0.3
RAB5CP51148 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC13.17□□□□□ -0.3
RAB5CP51148 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RAB5CP51148 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
RAB5CP51148 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC13.17□□□□□ -0.3
RAB5CP51148 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
RAB5CP51148 GPI-205ENST00000586425 1799 ntTSL 5 BASIC13.17□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms