Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 RPS15P9-201ENST00000494093 319 ntBASIC14.89□□□□□ -0.03
CENPAP49450 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC14.89□□□□□ -0.03
CENPAP49450 TBCB-205ENST00000585746 875 ntTSL 3 BASIC14.89□□□□□ -0.03
CENPAP49450 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
CENPAP49450 GGTLC5P-201ENST00000617623 998 ntBASIC14.89□□□□□ -0.03
CENPAP49450 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC14.89□□□□□ -0.03
CENPAP49450 AL805961.1-202ENST00000641562 540 ntBASIC14.89□□□□□ -0.03
CENPAP49450 AC107918.4-202ENST00000641623 219 ntBASIC14.89□□□□□ -0.03
CENPAP49450 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CENPAP49450 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CENPAP49450 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC14.89□□□□□ -0.03
CENPAP49450 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CENPAP49450 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC14.89□□□□□ -0.03
CENPAP49450 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
CENPAP49450 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CENPAP49450 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CENPAP49450 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CENPAP49450 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CENPAP49450 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC14.89□□□□□ -0.03
CENPAP49450 AC131009.4-201ENST00000624048 1740 ntBASIC14.89□□□□□ -0.03
CENPAP49450 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
CENPAP49450 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC14.89□□□□□ -0.03
CENPAP49450 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CENPAP49450 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC14.89□□□□□ -0.03
CENPAP49450 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC14.89□□□□□ -0.03
CENPAP49450 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CENPAP49450 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC14.88□□□□□ -0.03
CENPAP49450 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CENPAP49450 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CENPAP49450 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC14.88□□□□□ -0.03
CENPAP49450 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CENPAP49450 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CENPAP49450 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC14.88□□□□□ -0.03
CENPAP49450 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CENPAP49450 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CENPAP49450 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
CENPAP49450 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC14.88□□□□□ -0.03
CENPAP49450 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CENPAP49450 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CENPAP49450 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
CENPAP49450 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CENPAP49450 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CENPAP49450 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
CENPAP49450 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CENPAP49450 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CENPAP49450 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC14.88□□□□□ -0.03
CENPAP49450 INIP-202ENST00000374236 874 ntTSL 2 BASIC14.88□□□□□ -0.03
CENPAP49450 CDK2AP2P3-201ENST00000422476 372 ntBASIC14.88□□□□□ -0.03
CENPAP49450 RNPS1P1-201ENST00000507437 918 ntBASIC14.88□□□□□ -0.03
CENPAP49450 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC14.88□□□□□ -0.03
CENPAP49450 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC14.88□□□□□ -0.03
CENPAP49450 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC14.88□□□□□ -0.03
CENPAP49450 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC14.88□□□□□ -0.03
CENPAP49450 REXO1L3P-201ENST00000622202 1288 ntBASIC14.88□□□□□ -0.03
CENPAP49450 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CENPAP49450 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CENPAP49450 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC14.88□□□□□ -0.03
CENPAP49450 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
CENPAP49450 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CENPAP49450 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC14.88□□□□□ -0.03
CENPAP49450 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CENPAP49450 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CENPAP49450 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CENPAP49450 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CENPAP49450 AL353732.1-201ENST00000569618 1459 ntBASIC14.88□□□□□ -0.03
CENPAP49450 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
CENPAP49450 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
CENPAP49450 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC14.88□□□□□ -0.03
CENPAP49450 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC14.88□□□□□ -0.03
CENPAP49450 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CENPAP49450 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CENPAP49450 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CENPAP49450 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CENPAP49450 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC14.87□□□□□ -0.03
CENPAP49450 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
CENPAP49450 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
CENPAP49450 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CENPAP49450 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CENPAP49450 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CENPAP49450 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
CENPAP49450 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC14.87□□□□□ -0.03
CENPAP49450 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC14.87□□□□□ -0.03
CENPAP49450 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
CENPAP49450 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CENPAP49450 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC14.87□□□□□ -0.03
CENPAP49450 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
CENPAP49450 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CENPAP49450 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CENPAP49450 LINC01144-201ENST00000626198 1710 ntBASIC14.87□□□□□ -0.03
CENPAP49450 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC14.87□□□□□ -0.03
CENPAP49450 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
CENPAP49450 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC14.87□□□□□ -0.03
CENPAP49450 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CENPAP49450 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CENPAP49450 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CENPAP49450 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CENPAP49450 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CENPAP49450 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC14.87□□□□□ -0.03
CENPAP49450 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CENPAP49450 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC14.87□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms