Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
SLC6A12P48065 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SLC6A12P48065 ELL2P1-201ENST00000413990 1906 ntBASIC15.72■□□□□ 0.11
SLC6A12P48065 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SLC6A12P48065 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC15.72■□□□□ 0.11
SLC6A12P48065 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SLC6A12P48065 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
SLC6A12P48065 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
SLC6A12P48065 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SLC6A12P48065 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC15.71■□□□□ 0.11
SLC6A12P48065 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC15.71■□□□□ 0.11
SLC6A12P48065 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SLC6A12P48065 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SLC6A12P48065 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC15.71■□□□□ 0.11
SLC6A12P48065 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC15.71■□□□□ 0.11
SLC6A12P48065 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC15.71■□□□□ 0.11
SLC6A12P48065 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SLC6A12P48065 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC15.71■□□□□ 0.11
SLC6A12P48065 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SLC6A12P48065 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SLC6A12P48065 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SLC6A12P48065 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SLC6A12P48065 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC15.71■□□□□ 0.11
SLC6A12P48065 FAM220BP-201ENST00000377689 816 ntBASIC15.71■□□□□ 0.11
SLC6A12P48065 PTMS-202ENST00000389462 773 ntTSL 2 BASIC15.71■□□□□ 0.11
SLC6A12P48065 PP14571-201ENST00000404327 934 ntTSL 2 BASIC15.71■□□□□ 0.11
SLC6A12P48065 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC15.71■□□□□ 0.11
SLC6A12P48065 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC15.71■□□□□ 0.11
SLC6A12P48065 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC15.71■□□□□ 0.11
SLC6A12P48065 TIMM8BP1-201ENST00000452384 211 ntBASIC15.71■□□□□ 0.11
SLC6A12P48065 YBX1P5-201ENST00000509441 847 ntBASIC15.71■□□□□ 0.11
SLC6A12P48065 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC15.71■□□□□ 0.11
SLC6A12P48065 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC15.71■□□□□ 0.11
SLC6A12P48065 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC15.71■□□□□ 0.11
SLC6A12P48065 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC15.71■□□□□ 0.11
SLC6A12P48065 HOTTIP_1.1-201ENST00000620415 57 ntBASIC15.71■□□□□ 0.11
SLC6A12P48065 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
SLC6A12P48065 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SLC6A12P48065 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC15.71■□□□□ 0.11
SLC6A12P48065 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC15.71■□□□□ 0.11
SLC6A12P48065 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC15.71■□□□□ 0.11
SLC6A12P48065 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
SLC6A12P48065 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SLC6A12P48065 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
SLC6A12P48065 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
SLC6A12P48065 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC15.71■□□□□ 0.1
SLC6A12P48065 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
SLC6A12P48065 AP001282.1-201ENST00000531301 1499 ntBASIC15.71■□□□□ 0.1
SLC6A12P48065 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC15.71■□□□□ 0.1
SLC6A12P48065 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
SLC6A12P48065 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC15.71■□□□□ 0.1
SLC6A12P48065 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
SLC6A12P48065 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
SLC6A12P48065 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
SLC6A12P48065 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SLC6A12P48065 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SLC6A12P48065 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC15.7■□□□□ 0.1
SLC6A12P48065 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SLC6A12P48065 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC15.7■□□□□ 0.1
SLC6A12P48065 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SLC6A12P48065 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
SLC6A12P48065 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SLC6A12P48065 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SLC6A12P48065 CD82-202ENST00000342935 967 ntTSL 5 BASIC15.7■□□□□ 0.1
SLC6A12P48065 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC15.7■□□□□ 0.1
SLC6A12P48065 CBR1-202ENST00000399191 838 ntTSL 3 BASIC15.7■□□□□ 0.1
SLC6A12P48065 COX10-202ENST00000429152 875 ntTSL 2 BASIC15.7■□□□□ 0.1
SLC6A12P48065 DNAJB3-201ENST00000446806 729 ntBASIC15.7■□□□□ 0.1
SLC6A12P48065 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC15.7■□□□□ 0.1
SLC6A12P48065 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC15.7■□□□□ 0.1
SLC6A12P48065 AC069335.1-201ENST00000489972 472 ntBASIC15.7■□□□□ 0.1
SLC6A12P48065 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC15.7■□□□□ 0.1
SLC6A12P48065 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC15.7■□□□□ 0.1
SLC6A12P48065 PUS1-205ENST00000535067 838 ntTSL 3 BASIC15.7■□□□□ 0.1
SLC6A12P48065 AC024267.1-201ENST00000582320 895 ntBASIC15.7■□□□□ 0.1
SLC6A12P48065 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC15.7■□□□□ 0.1
SLC6A12P48065 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC15.7■□□□□ 0.1
SLC6A12P48065 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
SLC6A12P48065 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
SLC6A12P48065 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
SLC6A12P48065 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC15.7■□□□□ 0.1
SLC6A12P48065 AC011477.6-201ENST00000604980 1927 ntBASIC15.7■□□□□ 0.1
SLC6A12P48065 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SLC6A12P48065 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SLC6A12P48065 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SLC6A12P48065 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SLC6A12P48065 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC15.7■□□□□ 0.1
SLC6A12P48065 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SLC6A12P48065 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC15.7■□□□□ 0.1
SLC6A12P48065 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SLC6A12P48065 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
SLC6A12P48065 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
SLC6A12P48065 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC15.69■□□□□ 0.1
SLC6A12P48065 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
SLC6A12P48065 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SLC6A12P48065 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC15.69■□□□□ 0.1
SLC6A12P48065 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC15.69■□□□□ 0.1
SLC6A12P48065 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
SLC6A12P48065 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
SLC6A12P48065 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms