Protein–RNA interactions for Protein: P42695

NCAPD3, Condensin-2 complex subunit D3, humanhuman

Predictions only

Length 1,498 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCAPD3P42695 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.09
NCAPD3P42695 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.09
NCAPD3P42695 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.09
NCAPD3P42695 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC28.14■■■□□ 2.09
NCAPD3P42695 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC28.14■■■□□ 2.09
NCAPD3P42695 AL592424.1-201ENST00000563624 1536 ntBASIC28.13■■■□□ 2.09
NCAPD3P42695 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC28.13■■■□□ 2.09
NCAPD3P42695 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC28.13■■■□□ 2.09
NCAPD3P42695 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC28.13■■■□□ 2.09
NCAPD3P42695 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC28.13■■■□□ 2.09
NCAPD3P42695 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC28.13■■■□□ 2.09
NCAPD3P42695 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
NCAPD3P42695 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC28.13■■■□□ 2.09
NCAPD3P42695 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
NCAPD3P42695 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
NCAPD3P42695 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC28.13■■■□□ 2.09
NCAPD3P42695 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC28.13■■■□□ 2.09
NCAPD3P42695 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
NCAPD3P42695 ETV2-208ENST00000621247 941 ntTSL 5 BASIC28.13■■■□□ 2.09
NCAPD3P42695 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
NCAPD3P42695 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC28.12■■■□□ 2.09
NCAPD3P42695 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
NCAPD3P42695 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
NCAPD3P42695 AL603756.1-201ENST00000606511 2163 ntBASIC28.12■■■□□ 2.09
NCAPD3P42695 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC28.12■■■□□ 2.09
NCAPD3P42695 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC28.12■■■□□ 2.09
NCAPD3P42695 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC28.12■■■□□ 2.09
NCAPD3P42695 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
NCAPD3P42695 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC28.12■■■□□ 2.09
NCAPD3P42695 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
NCAPD3P42695 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC28.12■■■□□ 2.09
NCAPD3P42695 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
NCAPD3P42695 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC28.12■■■□□ 2.09
NCAPD3P42695 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
NCAPD3P42695 KRT18P25-201ENST00000508931 1278 ntBASIC28.12■■■□□ 2.09
NCAPD3P42695 AC044849.1-201ENST00000519737 1188 ntBASIC28.12■■■□□ 2.09
NCAPD3P42695 CU633904.3-201ENST00000624042 1029 ntBASIC28.12■■■□□ 2.09
NCAPD3P42695 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC28.12■■■□□ 2.09
NCAPD3P42695 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
NCAPD3P42695 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
NCAPD3P42695 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC28.12■■■□□ 2.09
NCAPD3P42695 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC28.12■■■□□ 2.09
NCAPD3P42695 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC28.12■■■□□ 2.09
NCAPD3P42695 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC28.11■■■□□ 2.09
NCAPD3P42695 KRT8P35-201ENST00000483942 1338 ntBASIC28.11■■■□□ 2.09
NCAPD3P42695 GATB-213ENST00000515812 1893 ntTSL 5 BASIC28.11■■■□□ 2.09
NCAPD3P42695 FOS-202ENST00000535987 1402 ntTSL 2 BASIC28.11■■■□□ 2.09
NCAPD3P42695 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC28.11■■■□□ 2.09
NCAPD3P42695 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC28.11■■■□□ 2.09
NCAPD3P42695 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
NCAPD3P42695 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC28.11■■■□□ 2.09
NCAPD3P42695 NKAIN1P1-201ENST00000435754 582 ntBASIC28.11■■■□□ 2.09
NCAPD3P42695 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC28.11■■■□□ 2.09
NCAPD3P42695 AC008267.1-201ENST00000474858 1069 ntBASIC28.11■■■□□ 2.09
NCAPD3P42695 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC28.11■■■□□ 2.09
NCAPD3P42695 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC28.11■■■□□ 2.09
NCAPD3P42695 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC28.11■■■□□ 2.09
NCAPD3P42695 PRKXP1-201ENST00000561423 1122 ntBASIC28.11■■■□□ 2.09
NCAPD3P42695 MIR3907-201ENST00000579424 151 ntBASIC28.11■■■□□ 2.09
NCAPD3P42695 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC28.11■■■□□ 2.09
NCAPD3P42695 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
NCAPD3P42695 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
NCAPD3P42695 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
NCAPD3P42695 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
NCAPD3P42695 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC28.11■■■□□ 2.09
NCAPD3P42695 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
NCAPD3P42695 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC28.11■■■□□ 2.09
NCAPD3P42695 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC28.11■■■□□ 2.09
NCAPD3P42695 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC28.11■■■□□ 2.09
NCAPD3P42695 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC28.11■■■□□ 2.09
NCAPD3P42695 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC28.1■■■□□ 2.09
NCAPD3P42695 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC28.1■■■□□ 2.09
NCAPD3P42695 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC28.1■■■□□ 2.09
NCAPD3P42695 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
NCAPD3P42695 SMS-201ENST00000379404 1174 ntTSL 3 BASIC28.1■■■□□ 2.09
NCAPD3P42695 AL355334.1-201ENST00000417713 215 ntBASIC28.1■■■□□ 2.09
NCAPD3P42695 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC28.1■■■□□ 2.09
NCAPD3P42695 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC28.1■■■□□ 2.09
NCAPD3P42695 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC28.1■■■□□ 2.09
NCAPD3P42695 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
NCAPD3P42695 DNAJC17-212ENST00000627802 428 ntTSL 4 BASIC28.1■■■□□ 2.09
NCAPD3P42695 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
NCAPD3P42695 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
NCAPD3P42695 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
NCAPD3P42695 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC28.1■■■□□ 2.09
NCAPD3P42695 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC28.1■■■□□ 2.09
NCAPD3P42695 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
NCAPD3P42695 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
NCAPD3P42695 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC28.1■■■□□ 2.09
NCAPD3P42695 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC28.09■■■□□ 2.09
NCAPD3P42695 PHKG1P2-201ENST00000457537 863 ntBASIC28.09■■■□□ 2.09
NCAPD3P42695 SERPINA13P-202ENST00000478994 924 ntBASIC28.09■■■□□ 2.09
NCAPD3P42695 AC134698.3-201ENST00000523880 214 ntBASIC28.09■■■□□ 2.09
NCAPD3P42695 FGFR3P5-201ENST00000564496 886 ntBASIC28.09■■■□□ 2.09
NCAPD3P42695 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC28.09■■■□□ 2.09
NCAPD3P42695 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC28.09■■■□□ 2.09
NCAPD3P42695 VILL-207ENST00000465644 1857 ntTSL 5 BASIC28.09■■■□□ 2.09
NCAPD3P42695 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC28.09■■■□□ 2.09
NCAPD3P42695 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC28.09■■■□□ 2.09
NCAPD3P42695 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC28.09■■■□□ 2.09
Retrieved 100 of 98,524 protein–RNA pairs in 64.4 ms