Protein–RNA interactions for Protein: P40198

CEACAM3, Carcinoembryonic antigen-related cell adhesion molecule 3, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3P40198 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CEACAM3P40198 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CEACAM3P40198 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
CEACAM3P40198 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CEACAM3P40198 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CEACAM3P40198 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
CEACAM3P40198 PCDHA14-201ENST00000506751 2298 ntBASIC13.36□□□□□ -0.27
CEACAM3P40198 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC13.36□□□□□ -0.27
CEACAM3P40198 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CEACAM3P40198 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CEACAM3P40198 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CEACAM3P40198 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CEACAM3P40198 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CEACAM3P40198 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CEACAM3P40198 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC13.35□□□□□ -0.27
CEACAM3P40198 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CEACAM3P40198 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CEACAM3P40198 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
CEACAM3P40198 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC13.35□□□□□ -0.27
CEACAM3P40198 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
CEACAM3P40198 NORAD-201ENST00000565493 5339 ntBASIC13.35□□□□□ -0.27
CEACAM3P40198 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CEACAM3P40198 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
CEACAM3P40198 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CEACAM3P40198 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC13.35□□□□□ -0.27
CEACAM3P40198 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CEACAM3P40198 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CEACAM3P40198 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
CEACAM3P40198 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC13.35□□□□□ -0.27
CEACAM3P40198 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CEACAM3P40198 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CEACAM3P40198 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CEACAM3P40198 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CEACAM3P40198 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC13.35□□□□□ -0.27
CEACAM3P40198 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC13.35□□□□□ -0.27
CEACAM3P40198 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC13.35□□□□□ -0.27
CEACAM3P40198 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC13.35□□□□□ -0.27
CEACAM3P40198 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC13.35□□□□□ -0.27
CEACAM3P40198 DHDH-204ENST00000523250 634 ntTSL 5 BASIC13.35□□□□□ -0.27
CEACAM3P40198 AC105233.2-201ENST00000523697 349 ntBASIC13.35□□□□□ -0.27
CEACAM3P40198 AF228730.5-201ENST00000530288 346 ntBASIC13.35□□□□□ -0.27
CEACAM3P40198 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CEACAM3P40198 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC13.35□□□□□ -0.27
CEACAM3P40198 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CEACAM3P40198 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC13.35□□□□□ -0.27
CEACAM3P40198 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC13.35□□□□□ -0.27
CEACAM3P40198 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
CEACAM3P40198 AC008267.7-201ENST00000624570 1194 ntBASIC13.35□□□□□ -0.27
CEACAM3P40198 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC13.35□□□□□ -0.27
CEACAM3P40198 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC13.35□□□□□ -0.27
CEACAM3P40198 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
CEACAM3P40198 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CEACAM3P40198 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CEACAM3P40198 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
CEACAM3P40198 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC13.35□□□□□ -0.27
CEACAM3P40198 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CEACAM3P40198 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC13.35□□□□□ -0.27
CEACAM3P40198 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CEACAM3P40198 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CEACAM3P40198 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CEACAM3P40198 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
CEACAM3P40198 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CEACAM3P40198 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CEACAM3P40198 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC13.35□□□□□ -0.27
CEACAM3P40198 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
CEACAM3P40198 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CEACAM3P40198 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CEACAM3P40198 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
CEACAM3P40198 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
CEACAM3P40198 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
CEACAM3P40198 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
CEACAM3P40198 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
CEACAM3P40198 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CEACAM3P40198 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC13.34□□□□□ -0.27
CEACAM3P40198 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
CEACAM3P40198 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
CEACAM3P40198 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CEACAM3P40198 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CEACAM3P40198 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CEACAM3P40198 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CEACAM3P40198 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC13.34□□□□□ -0.27
CEACAM3P40198 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
CEACAM3P40198 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
CEACAM3P40198 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CEACAM3P40198 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CEACAM3P40198 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
CEACAM3P40198 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC13.34□□□□□ -0.27
CEACAM3P40198 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC13.34□□□□□ -0.27
CEACAM3P40198 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC13.34□□□□□ -0.27
CEACAM3P40198 AP000344.2-201ENST00000512987 629 ntBASIC13.34□□□□□ -0.27
CEACAM3P40198 PUS1-205ENST00000535067 838 ntTSL 3 BASIC13.34□□□□□ -0.27
CEACAM3P40198 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CEACAM3P40198 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC13.34□□□□□ -0.27
CEACAM3P40198 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC13.34□□□□□ -0.27
CEACAM3P40198 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC13.34□□□□□ -0.27
CEACAM3P40198 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC13.34□□□□□ -0.27
CEACAM3P40198 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC13.34□□□□□ -0.27
CEACAM3P40198 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC13.34□□□□□ -0.27
CEACAM3P40198 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC13.34□□□□□ -0.27
CEACAM3P40198 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC13.34□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms