Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
KRT9P35527 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC17.91■□□□□ 0.46
KRT9P35527 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
KRT9P35527 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
KRT9P35527 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
KRT9P35527 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
KRT9P35527 AC073347.1-201ENST00000421633 2643 ntBASIC17.91■□□□□ 0.46
KRT9P35527 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
KRT9P35527 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
KRT9P35527 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
KRT9P35527 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
KRT9P35527 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC17.91■□□□□ 0.46
KRT9P35527 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
KRT9P35527 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC17.91■□□□□ 0.46
KRT9P35527 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
KRT9P35527 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
KRT9P35527 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
KRT9P35527 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
KRT9P35527 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
KRT9P35527 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC17.91■□□□□ 0.46
KRT9P35527 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC17.91■□□□□ 0.46
KRT9P35527 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
KRT9P35527 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC17.91■□□□□ 0.46
KRT9P35527 METTL26-205ENST00000397666 726 ntTSL 2 BASIC17.91■□□□□ 0.46
KRT9P35527 AC098831.1-202ENST00000438821 336 ntBASIC17.91■□□□□ 0.46
KRT9P35527 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
KRT9P35527 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC17.91■□□□□ 0.46
KRT9P35527 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC17.91■□□□□ 0.46
KRT9P35527 RNA5SP419-201ENST00000515908 135 ntBASIC17.91■□□□□ 0.46
KRT9P35527 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC17.91■□□□□ 0.46
KRT9P35527 CIPC-205ENST00000555437 566 ntTSL 3 BASIC17.91■□□□□ 0.46
KRT9P35527 LITAF-211ENST00000572255 516 ntTSL 4 BASIC17.91■□□□□ 0.46
KRT9P35527 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
KRT9P35527 AC005412.3-201ENST00000580309 715 ntBASIC17.91■□□□□ 0.46
KRT9P35527 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
KRT9P35527 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
KRT9P35527 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC17.91■□□□□ 0.46
KRT9P35527 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
KRT9P35527 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC17.91■□□□□ 0.46
KRT9P35527 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
KRT9P35527 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
KRT9P35527 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
KRT9P35527 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
KRT9P35527 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
KRT9P35527 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
KRT9P35527 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
KRT9P35527 WARS-232ENST00000556645 2508 ntTSL 5 BASIC17.91■□□□□ 0.46
KRT9P35527 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
KRT9P35527 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
KRT9P35527 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
KRT9P35527 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
KRT9P35527 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC17.9■□□□□ 0.46
KRT9P35527 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
KRT9P35527 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC17.9■□□□□ 0.46
KRT9P35527 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
KRT9P35527 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
KRT9P35527 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
KRT9P35527 SLC9A3P2-201ENST00000447821 2021 ntBASIC17.9■□□□□ 0.46
KRT9P35527 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
KRT9P35527 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
KRT9P35527 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
KRT9P35527 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
KRT9P35527 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
KRT9P35527 AC108751.1-201ENST00000490852 363 ntBASIC17.9■□□□□ 0.46
KRT9P35527 PENK-208ENST00000523051 772 ntTSL 5 BASIC17.9■□□□□ 0.46
KRT9P35527 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
KRT9P35527 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC17.9■□□□□ 0.46
KRT9P35527 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC17.9■□□□□ 0.46
KRT9P35527 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC17.9■□□□□ 0.46
KRT9P35527 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
KRT9P35527 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
KRT9P35527 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
KRT9P35527 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC17.9■□□□□ 0.46
KRT9P35527 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC17.9■□□□□ 0.46
KRT9P35527 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC17.9■□□□□ 0.46
KRT9P35527 HLA-A-201ENST00000376802 1334 ntBASIC17.9■□□□□ 0.46
KRT9P35527 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
KRT9P35527 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
KRT9P35527 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
KRT9P35527 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
KRT9P35527 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
KRT9P35527 ING5-213ENST00000636051 4199 ntTSL 5 BASIC17.9■□□□□ 0.46
KRT9P35527 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
KRT9P35527 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
KRT9P35527 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.46
KRT9P35527 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC17.89■□□□□ 0.46
KRT9P35527 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
KRT9P35527 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC17.89■□□□□ 0.45
KRT9P35527 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
KRT9P35527 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
KRT9P35527 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
KRT9P35527 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
KRT9P35527 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
KRT9P35527 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
KRT9P35527 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
KRT9P35527 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
KRT9P35527 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
KRT9P35527 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
KRT9P35527 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC17.89■□□□□ 0.45
KRT9P35527 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms