Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC20.93■□□□□ 0.94
RXRBP28702 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
RXRBP28702 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RXRBP28702 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RXRBP28702 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RXRBP28702 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
RXRBP28702 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC20.92■□□□□ 0.94
RXRBP28702 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC20.92■□□□□ 0.94
RXRBP28702 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC20.92■□□□□ 0.94
RXRBP28702 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
RXRBP28702 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RXRBP28702 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC20.92■□□□□ 0.94
RXRBP28702 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC20.92■□□□□ 0.94
RXRBP28702 CEP164P1-201ENST00000455142 418 ntBASIC20.92■□□□□ 0.94
RXRBP28702 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC20.92■□□□□ 0.94
RXRBP28702 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC20.92■□□□□ 0.94
RXRBP28702 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
RXRBP28702 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC20.92■□□□□ 0.94
RXRBP28702 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RXRBP28702 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC20.92■□□□□ 0.94
RXRBP28702 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RXRBP28702 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC20.92■□□□□ 0.94
RXRBP28702 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
RXRBP28702 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC20.91■□□□□ 0.94
RXRBP28702 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
RXRBP28702 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RXRBP28702 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
RXRBP28702 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RXRBP28702 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
RXRBP28702 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RXRBP28702 TMEM242-201ENST00000367144 1030 ntTSL 2 BASIC20.91■□□□□ 0.94
RXRBP28702 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC20.91■□□□□ 0.94
RXRBP28702 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC20.91■□□□□ 0.94
RXRBP28702 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
RXRBP28702 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
RXRBP28702 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC20.91■□□□□ 0.94
RXRBP28702 KRT8P35-201ENST00000483942 1338 ntBASIC20.91■□□□□ 0.94
RXRBP28702 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC20.91■□□□□ 0.94
RXRBP28702 AC133963.1-201ENST00000504166 1679 ntBASIC20.91■□□□□ 0.94
RXRBP28702 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC20.91■□□□□ 0.94
RXRBP28702 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC20.91■□□□□ 0.94
RXRBP28702 AL845331.2-201ENST00000561882 1044 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
RXRBP28702 AC015910.1-201ENST00000579400 975 ntBASIC20.91■□□□□ 0.94
RXRBP28702 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC20.91■□□□□ 0.94
RXRBP28702 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC20.91■□□□□ 0.94
RXRBP28702 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC20.9■□□□□ 0.94
RXRBP28702 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC20.9■□□□□ 0.94
RXRBP28702 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC20.9■□□□□ 0.94
RXRBP28702 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC20.9■□□□□ 0.94
RXRBP28702 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
RXRBP28702 DRD5P1-201ENST00000456605 1438 ntBASIC20.9■□□□□ 0.94
RXRBP28702 FBXO16-202ENST00000380254 1343 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
RXRBP28702 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
RXRBP28702 AC004987.2-201ENST00000395959 1148 ntBASIC20.9■□□□□ 0.94
RXRBP28702 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
RXRBP28702 AC078991.1-201ENST00000437297 610 ntBASIC20.9■□□□□ 0.94
RXRBP28702 EEF1DP4-201ENST00000446006 880 ntBASIC20.9■□□□□ 0.94
RXRBP28702 C3orf38-204ENST00000486971 1259 ntTSL 2 BASIC20.9■□□□□ 0.94
RXRBP28702 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC20.9■□□□□ 0.94
RXRBP28702 IGLV3-15-201ENST00000518356 244 ntBASIC20.9■□□□□ 0.94
RXRBP28702 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
RXRBP28702 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC20.9■□□□□ 0.94
RXRBP28702 ECM1P1-201ENST00000604092 1279 ntBASIC20.9■□□□□ 0.94
RXRBP28702 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
RXRBP28702 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RXRBP28702 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RXRBP28702 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RXRBP28702 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
RXRBP28702 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
RXRBP28702 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
RXRBP28702 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC20.89■□□□□ 0.94
RXRBP28702 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.94
RXRBP28702 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC20.89■□□□□ 0.94
RXRBP28702 AL355312.1-201ENST00000407115 2176 ntBASIC20.89■□□□□ 0.94
RXRBP28702 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.94
RXRBP28702 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RXRBP28702 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC20.89■□□□□ 0.93
RXRBP28702 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RXRBP28702 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
RXRBP28702 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC20.89■□□□□ 0.93
RXRBP28702 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC20.89■□□□□ 0.93
RXRBP28702 ZNF124-206ENST00000543802 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
RXRBP28702 UPF3AP2-202ENST00000578315 730 ntTSL 5 BASIC20.89■□□□□ 0.93
RXRBP28702 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC20.89■□□□□ 0.93
RXRBP28702 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
RXRBP28702 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
RXRBP28702 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RXRBP28702 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RXRBP28702 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC20.89■□□□□ 0.93
RXRBP28702 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC20.89■□□□□ 0.93
RXRBP28702 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
RXRBP28702 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RXRBP28702 SERF2-201ENST00000249786 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RXRBP28702 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
RXRBP28702 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RXRBP28702 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RXRBP28702 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RXRBP28702 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC20.88■□□□□ 0.93
RXRBP28702 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RXRBP28702 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms