Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC16.33■□□□□ 0.2
XRCC1P18887 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
XRCC1P18887 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
XRCC1P18887 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
XRCC1P18887 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC16.32■□□□□ 0.2
XRCC1P18887 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
XRCC1P18887 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
XRCC1P18887 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
XRCC1P18887 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
XRCC1P18887 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
XRCC1P18887 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
XRCC1P18887 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
XRCC1P18887 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
XRCC1P18887 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC16.32■□□□□ 0.2
XRCC1P18887 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
XRCC1P18887 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC16.32■□□□□ 0.2
XRCC1P18887 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC16.32■□□□□ 0.2
XRCC1P18887 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
XRCC1P18887 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
XRCC1P18887 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC16.32■□□□□ 0.2
XRCC1P18887 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
XRCC1P18887 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC16.32■□□□□ 0.2
XRCC1P18887 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
XRCC1P18887 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
XRCC1P18887 RARRES2P8-201ENST00000566335 367 ntBASIC16.32■□□□□ 0.2
XRCC1P18887 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC16.32■□□□□ 0.2
XRCC1P18887 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC16.32■□□□□ 0.2
XRCC1P18887 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
XRCC1P18887 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC16.32■□□□□ 0.2
XRCC1P18887 AC004835.2-201ENST00000603762 682 ntBASIC16.32■□□□□ 0.2
XRCC1P18887 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
XRCC1P18887 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC16.32■□□□□ 0.2
XRCC1P18887 MTHFR-217ENST00000641820 1569 ntBASIC16.32■□□□□ 0.2
XRCC1P18887 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
XRCC1P18887 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
XRCC1P18887 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
XRCC1P18887 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
XRCC1P18887 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
XRCC1P18887 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
XRCC1P18887 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
XRCC1P18887 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
XRCC1P18887 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
XRCC1P18887 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
XRCC1P18887 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
XRCC1P18887 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
XRCC1P18887 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
XRCC1P18887 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC16.31■□□□□ 0.2
XRCC1P18887 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
XRCC1P18887 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC16.31■□□□□ 0.2
XRCC1P18887 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
XRCC1P18887 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC16.31■□□□□ 0.2
XRCC1P18887 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
XRCC1P18887 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
XRCC1P18887 LBH-203ENST00000404397 543 ntTSL 4 BASIC16.31■□□□□ 0.2
XRCC1P18887 AC004461.1-201ENST00000412461 403 ntBASIC16.31■□□□□ 0.2
XRCC1P18887 TFAMP1-201ENST00000412727 736 ntBASIC16.31■□□□□ 0.2
XRCC1P18887 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC16.31■□□□□ 0.2
XRCC1P18887 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC16.31■□□□□ 0.2
XRCC1P18887 AC022145.2-201ENST00000598203 171 ntBASIC16.31■□□□□ 0.2
XRCC1P18887 AL031055.1-201ENST00000606362 631 ntBASIC16.31■□□□□ 0.2
XRCC1P18887 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC16.31■□□□□ 0.2
XRCC1P18887 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
XRCC1P18887 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC16.31■□□□□ 0.2
XRCC1P18887 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
XRCC1P18887 GCK-202ENST00000345378 2421 ntTSL 2 BASIC16.31■□□□□ 0.2
XRCC1P18887 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC16.31■□□□□ 0.2
XRCC1P18887 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC16.31■□□□□ 0.2
XRCC1P18887 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
XRCC1P18887 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC16.31■□□□□ 0.2
XRCC1P18887 SLC9A7P1-201ENST00000554295 3311 ntBASIC16.31■□□□□ 0.2
XRCC1P18887 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
XRCC1P18887 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
XRCC1P18887 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
XRCC1P18887 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
XRCC1P18887 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
XRCC1P18887 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
XRCC1P18887 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
XRCC1P18887 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
XRCC1P18887 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
XRCC1P18887 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC16.3■□□□□ 0.2
XRCC1P18887 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC16.3■□□□□ 0.2
XRCC1P18887 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
XRCC1P18887 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
XRCC1P18887 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
XRCC1P18887 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC16.3■□□□□ 0.2
XRCC1P18887 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
XRCC1P18887 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
XRCC1P18887 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
XRCC1P18887 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
XRCC1P18887 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
XRCC1P18887 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
XRCC1P18887 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC16.3■□□□□ 0.2
XRCC1P18887 KRT18P28-201ENST00000453838 1332 ntBASIC16.3■□□□□ 0.2
XRCC1P18887 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
XRCC1P18887 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
XRCC1P18887 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC16.3■□□□□ 0.2
XRCC1P18887 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
XRCC1P18887 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
XRCC1P18887 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC16.3■□□□□ 0.2
XRCC1P18887 PMS2P2-201ENST00000425039 1128 ntBASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms