Protein–RNA interactions for Protein: P12838

DEFA4, Neutrophil defensin 4, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA4P12838 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
DEFA4P12838 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
DEFA4P12838 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
DEFA4P12838 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC13.36□□□□□ -0.27
DEFA4P12838 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
DEFA4P12838 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
DEFA4P12838 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC13.36□□□□□ -0.27
DEFA4P12838 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
DEFA4P12838 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
DEFA4P12838 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
DEFA4P12838 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
DEFA4P12838 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
DEFA4P12838 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC13.36□□□□□ -0.27
DEFA4P12838 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
DEFA4P12838 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
DEFA4P12838 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
DEFA4P12838 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC13.36□□□□□ -0.27
DEFA4P12838 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC13.36□□□□□ -0.27
DEFA4P12838 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
DEFA4P12838 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC13.35□□□□□ -0.27
DEFA4P12838 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC13.35□□□□□ -0.27
DEFA4P12838 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
DEFA4P12838 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
DEFA4P12838 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
DEFA4P12838 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
DEFA4P12838 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
DEFA4P12838 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
DEFA4P12838 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
DEFA4P12838 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
DEFA4P12838 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
DEFA4P12838 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
DEFA4P12838 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
DEFA4P12838 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
DEFA4P12838 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC13.35□□□□□ -0.27
DEFA4P12838 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC13.35□□□□□ -0.27
DEFA4P12838 LAGE3P1-201ENST00000425356 484 ntBASIC13.35□□□□□ -0.27
DEFA4P12838 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC13.35□□□□□ -0.27
DEFA4P12838 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC13.35□□□□□ -0.27
DEFA4P12838 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
DEFA4P12838 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
DEFA4P12838 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
DEFA4P12838 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
DEFA4P12838 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC13.35□□□□□ -0.27
DEFA4P12838 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
DEFA4P12838 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
DEFA4P12838 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC13.35□□□□□ -0.27
DEFA4P12838 AC012313.10-201ENST00000623509 926 ntBASIC13.35□□□□□ -0.27
DEFA4P12838 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
DEFA4P12838 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC13.35□□□□□ -0.27
DEFA4P12838 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
DEFA4P12838 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC13.35□□□□□ -0.27
DEFA4P12838 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
DEFA4P12838 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
DEFA4P12838 VILL-207ENST00000465644 1857 ntTSL 5 BASIC13.35□□□□□ -0.27
DEFA4P12838 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC13.35□□□□□ -0.27
DEFA4P12838 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC13.35□□□□□ -0.27
DEFA4P12838 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
DEFA4P12838 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
DEFA4P12838 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
DEFA4P12838 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
DEFA4P12838 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC13.35□□□□□ -0.27
DEFA4P12838 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
DEFA4P12838 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
DEFA4P12838 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
DEFA4P12838 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
DEFA4P12838 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC13.34□□□□□ -0.27
DEFA4P12838 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
DEFA4P12838 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
DEFA4P12838 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
DEFA4P12838 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
DEFA4P12838 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC13.34□□□□□ -0.27
DEFA4P12838 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
DEFA4P12838 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
DEFA4P12838 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC13.34□□□□□ -0.27
DEFA4P12838 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC13.34□□□□□ -0.27
DEFA4P12838 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
DEFA4P12838 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC13.34□□□□□ -0.27
DEFA4P12838 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC13.34□□□□□ -0.27
DEFA4P12838 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC13.34□□□□□ -0.27
DEFA4P12838 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
DEFA4P12838 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC13.34□□□□□ -0.27
DEFA4P12838 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
DEFA4P12838 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
DEFA4P12838 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC13.34□□□□□ -0.27
DEFA4P12838 ARTN-206ENST00000472435 402 ntTSL 3 BASIC13.34□□□□□ -0.27
DEFA4P12838 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC13.34□□□□□ -0.27
DEFA4P12838 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC13.34□□□□□ -0.27
DEFA4P12838 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC13.34□□□□□ -0.27
DEFA4P12838 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
DEFA4P12838 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC13.34□□□□□ -0.27
DEFA4P12838 MIR1199-201ENST00000621445 119 ntBASIC13.34□□□□□ -0.27
DEFA4P12838 AC004706.3-202ENST00000621574 984 ntBASIC13.34□□□□□ -0.27
DEFA4P12838 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC13.34□□□□□ -0.27
DEFA4P12838 AF228730.7-201ENST00000641842 219 ntBASIC13.34□□□□□ -0.27
DEFA4P12838 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
DEFA4P12838 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
DEFA4P12838 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
DEFA4P12838 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
DEFA4P12838 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
DEFA4P12838 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 86.1 ms