Protein–RNA interactions for Protein: P08253

MMP2, 72 kDa type IV collagenase, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP2P08253 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
MMP2P08253 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC16.39■□□□□ 0.21
MMP2P08253 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
MMP2P08253 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC16.38■□□□□ 0.21
MMP2P08253 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
MMP2P08253 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
MMP2P08253 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
MMP2P08253 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC16.38■□□□□ 0.21
MMP2P08253 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
MMP2P08253 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
MMP2P08253 AL139400.1-201ENST00000366220 510 ntBASIC16.38■□□□□ 0.21
MMP2P08253 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC16.38■□□□□ 0.21
MMP2P08253 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC16.38■□□□□ 0.21
MMP2P08253 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC16.38■□□□□ 0.21
MMP2P08253 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC16.38■□□□□ 0.21
MMP2P08253 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC16.38■□□□□ 0.21
MMP2P08253 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC16.38■□□□□ 0.21
MMP2P08253 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC16.38■□□□□ 0.21
MMP2P08253 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC16.38■□□□□ 0.21
MMP2P08253 SNHG9-202ENST00000564014 471 ntBASIC16.38■□□□□ 0.21
MMP2P08253 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
MMP2P08253 AP001160.2-201ENST00000596071 487 ntBASIC16.38■□□□□ 0.21
MMP2P08253 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC16.38■□□□□ 0.21
MMP2P08253 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
MMP2P08253 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
MMP2P08253 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
MMP2P08253 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
MMP2P08253 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
MMP2P08253 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
MMP2P08253 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC16.38■□□□□ 0.21
MMP2P08253 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
MMP2P08253 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
MMP2P08253 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC16.38■□□□□ 0.21
MMP2P08253 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC16.38■□□□□ 0.21
MMP2P08253 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
MMP2P08253 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
MMP2P08253 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC16.38■□□□□ 0.21
MMP2P08253 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
MMP2P08253 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
MMP2P08253 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC16.37■□□□□ 0.21
MMP2P08253 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC16.37■□□□□ 0.21
MMP2P08253 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
MMP2P08253 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
MMP2P08253 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
MMP2P08253 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC16.37■□□□□ 0.21
MMP2P08253 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
MMP2P08253 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC16.37■□□□□ 0.21
MMP2P08253 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
MMP2P08253 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC16.37■□□□□ 0.21
MMP2P08253 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC16.37■□□□□ 0.21
MMP2P08253 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
MMP2P08253 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
MMP2P08253 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
MMP2P08253 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
MMP2P08253 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
MMP2P08253 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
MMP2P08253 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC16.37■□□□□ 0.21
MMP2P08253 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
MMP2P08253 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
MMP2P08253 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC16.37■□□□□ 0.21
MMP2P08253 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC16.37■□□□□ 0.21
MMP2P08253 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
MMP2P08253 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
MMP2P08253 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
MMP2P08253 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
MMP2P08253 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
MMP2P08253 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
MMP2P08253 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC16.36■□□□□ 0.21
MMP2P08253 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
MMP2P08253 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC16.36■□□□□ 0.21
MMP2P08253 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC16.36■□□□□ 0.21
MMP2P08253 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC16.36■□□□□ 0.21
MMP2P08253 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
MMP2P08253 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC16.36■□□□□ 0.21
MMP2P08253 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
MMP2P08253 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC16.36■□□□□ 0.21
MMP2P08253 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC16.36■□□□□ 0.21
MMP2P08253 AC109322.1-201ENST00000524499 1264 ntBASIC16.36■□□□□ 0.21
MMP2P08253 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC16.36■□□□□ 0.21
MMP2P08253 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC16.36■□□□□ 0.21
MMP2P08253 BANF1P1-201ENST00000553684 263 ntBASIC16.36■□□□□ 0.21
MMP2P08253 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC16.36■□□□□ 0.21
MMP2P08253 PAM16-215ENST00000577031 548 ntTSL 4 BASIC16.36■□□□□ 0.21
MMP2P08253 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC16.36■□□□□ 0.21
MMP2P08253 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC16.36■□□□□ 0.21
MMP2P08253 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
MMP2P08253 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
MMP2P08253 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
MMP2P08253 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
MMP2P08253 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
MMP2P08253 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC16.36■□□□□ 0.21
MMP2P08253 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
MMP2P08253 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
MMP2P08253 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
MMP2P08253 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
MMP2P08253 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
MMP2P08253 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC16.36■□□□□ 0.21
MMP2P08253 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
MMP2P08253 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
MMP2P08253 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms