Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
SFTPBP07988 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SFTPBP07988 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC14.29□□□□□ -0.12
SFTPBP07988 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SFTPBP07988 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
SFTPBP07988 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
SFTPBP07988 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC14.29□□□□□ -0.12
SFTPBP07988 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC14.29□□□□□ -0.12
SFTPBP07988 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
SFTPBP07988 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC14.29□□□□□ -0.12
SFTPBP07988 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SFTPBP07988 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
SFTPBP07988 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SFTPBP07988 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC14.28□□□□□ -0.12
SFTPBP07988 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SFTPBP07988 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SFTPBP07988 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SFTPBP07988 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
SFTPBP07988 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SFTPBP07988 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SFTPBP07988 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
SFTPBP07988 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SFTPBP07988 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC14.28□□□□□ -0.12
SFTPBP07988 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
SFTPBP07988 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC14.28□□□□□ -0.12
SFTPBP07988 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
SFTPBP07988 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC14.28□□□□□ -0.12
SFTPBP07988 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC14.28□□□□□ -0.12
SFTPBP07988 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SFTPBP07988 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
SFTPBP07988 MIR940-201ENST00000401276 94 ntBASIC14.28□□□□□ -0.12
SFTPBP07988 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
SFTPBP07988 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
SFTPBP07988 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC14.28□□□□□ -0.12
SFTPBP07988 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC14.28□□□□□ -0.12
SFTPBP07988 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SFTPBP07988 AC087163.2-201ENST00000457299 853 ntBASIC14.28□□□□□ -0.12
SFTPBP07988 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC14.28□□□□□ -0.12
SFTPBP07988 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC14.28□□□□□ -0.12
SFTPBP07988 AC104109.2-201ENST00000602919 1418 ntBASIC14.28□□□□□ -0.12
SFTPBP07988 AL671710.1-201ENST00000610245 2349 ntBASIC14.28□□□□□ -0.12
SFTPBP07988 PI4KAP1-204ENST00000612579 1703 ntBASIC14.28□□□□□ -0.12
SFTPBP07988 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC14.28□□□□□ -0.12
SFTPBP07988 AC002310.6-201ENST00000624451 1377 ntBASIC14.28□□□□□ -0.12
SFTPBP07988 AC117500.6-201ENST00000624871 588 ntBASIC14.28□□□□□ -0.12
SFTPBP07988 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC14.28□□□□□ -0.12
SFTPBP07988 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC14.28□□□□□ -0.12
SFTPBP07988 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
SFTPBP07988 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC14.28□□□□□ -0.12
SFTPBP07988 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SFTPBP07988 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
SFTPBP07988 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC14.28□□□□□ -0.12
SFTPBP07988 MBP-202ENST00000355994 2772 ntTSL 5 BASIC14.28□□□□□ -0.12
SFTPBP07988 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SFTPBP07988 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC14.28□□□□□ -0.12
SFTPBP07988 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
SFTPBP07988 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SFTPBP07988 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC14.27□□□□□ -0.12
SFTPBP07988 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SFTPBP07988 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SFTPBP07988 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
SFTPBP07988 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SFTPBP07988 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SFTPBP07988 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
SFTPBP07988 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
SFTPBP07988 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
SFTPBP07988 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC14.27□□□□□ -0.12
SFTPBP07988 SNX33P1-201ENST00000592116 1762 ntBASIC14.27□□□□□ -0.12
SFTPBP07988 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SFTPBP07988 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
SFTPBP07988 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
SFTPBP07988 AC006504.4-201ENST00000592118 1568 ntBASIC14.27□□□□□ -0.12
SFTPBP07988 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SFTPBP07988 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
SFTPBP07988 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
SFTPBP07988 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SFTPBP07988 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC14.27□□□□□ -0.12
SFTPBP07988 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
SFTPBP07988 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC14.27□□□□□ -0.12
SFTPBP07988 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
SFTPBP07988 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SFTPBP07988 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SFTPBP07988 MIR574-201ENST00000385209 96 ntBASIC14.27□□□□□ -0.13
SFTPBP07988 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
SFTPBP07988 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SFTPBP07988 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC14.27□□□□□ -0.13
SFTPBP07988 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC14.27□□□□□ -0.13
SFTPBP07988 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC14.27□□□□□ -0.13
SFTPBP07988 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC14.27□□□□□ -0.13
SFTPBP07988 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC14.27□□□□□ -0.13
SFTPBP07988 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC14.27□□□□□ -0.13
SFTPBP07988 RPS29-206ENST00000557111 488 ntTSL 2 BASIC14.27□□□□□ -0.13
SFTPBP07988 AC106730.1-201ENST00000566722 1090 ntBASIC14.27□□□□□ -0.13
SFTPBP07988 AC006557.2-201ENST00000592985 1240 ntBASIC14.27□□□□□ -0.13
SFTPBP07988 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC14.27□□□□□ -0.13
SFTPBP07988 AL356488.2-201ENST00000602755 427 ntBASIC14.27□□□□□ -0.13
SFTPBP07988 MIR1199-201ENST00000621445 119 ntBASIC14.27□□□□□ -0.13
SFTPBP07988 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC14.27□□□□□ -0.13
SFTPBP07988 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SFTPBP07988 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC14.27□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms