Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC16.14■□□□□ 0.17
CAPN1P07384 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CAPN1P07384 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CAPN1P07384 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CAPN1P07384 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CAPN1P07384 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CAPN1P07384 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CAPN1P07384 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CAPN1P07384 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CAPN1P07384 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CAPN1P07384 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
CAPN1P07384 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CAPN1P07384 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC16.13■□□□□ 0.17
CAPN1P07384 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC16.13■□□□□ 0.17
CAPN1P07384 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CAPN1P07384 AC007950.2-201ENST00000615045 2347 ntBASIC16.13■□□□□ 0.17
CAPN1P07384 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
CAPN1P07384 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
CAPN1P07384 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CAPN1P07384 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC16.13■□□□□ 0.17
CAPN1P07384 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
CAPN1P07384 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
CAPN1P07384 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CAPN1P07384 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CAPN1P07384 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
CAPN1P07384 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CAPN1P07384 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC16.13■□□□□ 0.17
CAPN1P07384 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
CAPN1P07384 AC254562.1-201ENST00000417586 456 ntBASIC16.13■□□□□ 0.17
CAPN1P07384 WDR53-204ENST00000433160 887 ntTSL 5 BASIC16.13■□□□□ 0.17
CAPN1P07384 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
CAPN1P07384 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC16.13■□□□□ 0.17
CAPN1P07384 AC087641.1-201ENST00000557561 1021 ntBASIC16.13■□□□□ 0.17
CAPN1P07384 AC005412.3-201ENST00000580309 715 ntBASIC16.13■□□□□ 0.17
CAPN1P07384 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC16.13■□□□□ 0.17
CAPN1P07384 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CAPN1P07384 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC16.13■□□□□ 0.17
CAPN1P07384 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC16.13■□□□□ 0.17
CAPN1P07384 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC16.13■□□□□ 0.17
CAPN1P07384 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CAPN1P07384 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
CAPN1P07384 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC16.13■□□□□ 0.17
CAPN1P07384 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CAPN1P07384 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
CAPN1P07384 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CAPN1P07384 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CAPN1P07384 AC129492.6-201ENST00000611383 1305 ntBASIC16.13■□□□□ 0.17
CAPN1P07384 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CAPN1P07384 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CAPN1P07384 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC16.13■□□□□ 0.17
CAPN1P07384 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CAPN1P07384 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CAPN1P07384 AL596087.1-201ENST00000400979 1969 ntBASIC16.13■□□□□ 0.17
CAPN1P07384 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
CAPN1P07384 GPAA1P2-202ENST00000606848 1787 ntBASIC16.13■□□□□ 0.17
CAPN1P07384 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
CAPN1P07384 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CAPN1P07384 ABR-203ENST00000536794 2213 ntTSL 2 BASIC16.13■□□□□ 0.17
CAPN1P07384 BLK-205ENST00000529894 2017 ntTSL 5 BASIC16.12■□□□□ 0.17
CAPN1P07384 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CAPN1P07384 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC16.12■□□□□ 0.17
CAPN1P07384 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CAPN1P07384 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
CAPN1P07384 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC16.12■□□□□ 0.17
CAPN1P07384 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC16.12■□□□□ 0.17
CAPN1P07384 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CAPN1P07384 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
CAPN1P07384 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CAPN1P07384 AC022188.1-201ENST00000620960 1664 ntBASIC16.12■□□□□ 0.17
CAPN1P07384 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CAPN1P07384 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CAPN1P07384 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CAPN1P07384 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC16.12■□□□□ 0.17
CAPN1P07384 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CAPN1P07384 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
CAPN1P07384 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC16.12■□□□□ 0.17
CAPN1P07384 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CAPN1P07384 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CAPN1P07384 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
CAPN1P07384 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC16.12■□□□□ 0.17
CAPN1P07384 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CAPN1P07384 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC16.12■□□□□ 0.17
CAPN1P07384 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC16.12■□□□□ 0.17
CAPN1P07384 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC16.12■□□□□ 0.17
CAPN1P07384 AP001350.2-201ENST00000625104 1094 ntBASIC16.12■□□□□ 0.17
CAPN1P07384 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC16.12■□□□□ 0.17
CAPN1P07384 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CAPN1P07384 AC132872.4-202ENST00000622924 2756 ntBASIC16.12■□□□□ 0.17
CAPN1P07384 AC063926.3-201ENST00000624734 5658 ntBASIC16.12■□□□□ 0.17
CAPN1P07384 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC16.12■□□□□ 0.17
CAPN1P07384 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC16.12■□□□□ 0.17
CAPN1P07384 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC16.12■□□□□ 0.17
CAPN1P07384 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CAPN1P07384 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CAPN1P07384 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CAPN1P07384 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CAPN1P07384 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
CAPN1P07384 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CAPN1P07384 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CAPN1P07384 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms