Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
HMGN1P05114 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
HMGN1P05114 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
HMGN1P05114 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC14.85□□□□□ -0.03
HMGN1P05114 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC14.85□□□□□ -0.03
HMGN1P05114 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HMGN1P05114 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC14.85□□□□□ -0.03
HMGN1P05114 LSM5-204ENST00000409909 740 ntTSL 2 BASIC14.85□□□□□ -0.03
HMGN1P05114 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HMGN1P05114 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC14.85□□□□□ -0.03
HMGN1P05114 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC14.85□□□□□ -0.03
HMGN1P05114 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
HMGN1P05114 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC14.85□□□□□ -0.03
HMGN1P05114 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC14.85□□□□□ -0.03
HMGN1P05114 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC14.85□□□□□ -0.03
HMGN1P05114 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC14.85□□□□□ -0.03
HMGN1P05114 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
HMGN1P05114 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
HMGN1P05114 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC14.85□□□□□ -0.03
HMGN1P05114 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC14.85□□□□□ -0.03
HMGN1P05114 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
HMGN1P05114 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HMGN1P05114 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
HMGN1P05114 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC14.85□□□□□ -0.03
HMGN1P05114 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC14.85□□□□□ -0.03
HMGN1P05114 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
HMGN1P05114 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC14.85□□□□□ -0.03
HMGN1P05114 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HMGN1P05114 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
HMGN1P05114 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HMGN1P05114 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
HMGN1P05114 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC14.84□□□□□ -0.03
HMGN1P05114 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HMGN1P05114 U82695.1-201ENST00000635752 1889 ntBASIC14.84□□□□□ -0.03
HMGN1P05114 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HMGN1P05114 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
HMGN1P05114 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
HMGN1P05114 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
HMGN1P05114 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
HMGN1P05114 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HMGN1P05114 PRAL-201ENST00000624952 3286 ntBASIC14.84□□□□□ -0.03
HMGN1P05114 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
HMGN1P05114 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
HMGN1P05114 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
HMGN1P05114 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC14.84□□□□□ -0.03
HMGN1P05114 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HMGN1P05114 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC14.84□□□□□ -0.03
HMGN1P05114 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
HMGN1P05114 ELK2BP-201ENST00000415014 1224 ntBASIC14.84□□□□□ -0.03
HMGN1P05114 LAGE3P1-201ENST00000425356 484 ntBASIC14.84□□□□□ -0.03
HMGN1P05114 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC14.84□□□□□ -0.03
HMGN1P05114 FGFR3P6-201ENST00000457012 610 ntBASIC14.84□□□□□ -0.03
HMGN1P05114 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC14.84□□□□□ -0.03
HMGN1P05114 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC14.84□□□□□ -0.03
HMGN1P05114 AC008608.2-201ENST00000606089 416 ntBASIC14.84□□□□□ -0.03
HMGN1P05114 AL121772.3-201ENST00000610840 674 ntBASIC14.84□□□□□ -0.03
HMGN1P05114 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC14.84□□□□□ -0.03
HMGN1P05114 AL358472.4-201ENST00000633140 710 ntBASIC14.84□□□□□ -0.03
HMGN1P05114 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
HMGN1P05114 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
HMGN1P05114 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
HMGN1P05114 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HMGN1P05114 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
HMGN1P05114 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC14.84□□□□□ -0.03
HMGN1P05114 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
HMGN1P05114 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC14.84□□□□□ -0.03
HMGN1P05114 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
HMGN1P05114 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC14.84□□□□□ -0.03
HMGN1P05114 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC14.84□□□□□ -0.03
HMGN1P05114 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HMGN1P05114 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
HMGN1P05114 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
HMGN1P05114 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
HMGN1P05114 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC14.84□□□□□ -0.03
HMGN1P05114 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HMGN1P05114 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC14.84□□□□□ -0.03
HMGN1P05114 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
HMGN1P05114 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC14.84□□□□□ -0.03
HMGN1P05114 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC14.84□□□□□ -0.03
HMGN1P05114 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HMGN1P05114 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
HMGN1P05114 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HMGN1P05114 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
HMGN1P05114 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC14.83□□□□□ -0.03
HMGN1P05114 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC14.83□□□□□ -0.03
HMGN1P05114 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
HMGN1P05114 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
HMGN1P05114 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
HMGN1P05114 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HMGN1P05114 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
HMGN1P05114 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
HMGN1P05114 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HMGN1P05114 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC14.83□□□□□ -0.04
HMGN1P05114 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
HMGN1P05114 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
HMGN1P05114 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
HMGN1P05114 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
HMGN1P05114 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC14.83□□□□□ -0.04
HMGN1P05114 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
HMGN1P05114 RPS15P9-201ENST00000494093 319 ntBASIC14.83□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms