Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CD74P04233 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC13.76□□□□□ -0.21
CD74P04233 NID2-208ENST00000617139 3827 ntTSL 5 BASIC13.76□□□□□ -0.21
CD74P04233 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
CD74P04233 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
CD74P04233 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC13.76□□□□□ -0.21
CD74P04233 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
CD74P04233 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC13.76□□□□□ -0.21
CD74P04233 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC13.76□□□□□ -0.21
CD74P04233 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CD74P04233 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CD74P04233 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC13.75□□□□□ -0.21
CD74P04233 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
CD74P04233 AC104581.4-201ENST00000623126 3052 ntBASIC13.75□□□□□ -0.21
CD74P04233 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC13.75□□□□□ -0.21
CD74P04233 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
CD74P04233 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CD74P04233 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC13.75□□□□□ -0.21
CD74P04233 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CD74P04233 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
CD74P04233 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CD74P04233 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CD74P04233 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CD74P04233 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC13.75□□□□□ -0.21
CD74P04233 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CD74P04233 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CD74P04233 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CD74P04233 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC13.75□□□□□ -0.21
CD74P04233 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC13.75□□□□□ -0.21
CD74P04233 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC13.75□□□□□ -0.21
CD74P04233 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
CD74P04233 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CD74P04233 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
CD74P04233 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CD74P04233 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CD74P04233 POM121L3P-201ENST00000419331 1163 ntBASIC13.75□□□□□ -0.21
CD74P04233 AC026396.1-201ENST00000419388 421 ntBASIC13.75□□□□□ -0.21
CD74P04233 CDK2AP2P3-201ENST00000422476 372 ntBASIC13.75□□□□□ -0.21
CD74P04233 KRT17P6-201ENST00000453795 1220 ntBASIC13.75□□□□□ -0.21
CD74P04233 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CD74P04233 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC13.75□□□□□ -0.21
CD74P04233 AC064862.7-201ENST00000604520 867 ntBASIC13.75□□□□□ -0.21
CD74P04233 AL121672.3-201ENST00000608644 468 ntBASIC13.75□□□□□ -0.21
CD74P04233 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CD74P04233 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CD74P04233 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CD74P04233 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CD74P04233 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CD74P04233 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC13.75□□□□□ -0.21
CD74P04233 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CD74P04233 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CD74P04233 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CD74P04233 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
CD74P04233 AC106881.1-201ENST00000605849 3329 ntBASIC13.75□□□□□ -0.21
CD74P04233 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
CD74P04233 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
CD74P04233 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CD74P04233 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CD74P04233 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CD74P04233 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
CD74P04233 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC13.75□□□□□ -0.21
CD74P04233 AC105250.1-201ENST00000509378 2057 ntBASIC13.75□□□□□ -0.21
CD74P04233 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CD74P04233 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
CD74P04233 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CD74P04233 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC13.74□□□□□ -0.21
CD74P04233 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CD74P04233 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC13.74□□□□□ -0.21
CD74P04233 AC090616.6-203ENST00000579186 1945 ntBASIC13.74□□□□□ -0.21
CD74P04233 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC13.74□□□□□ -0.21
CD74P04233 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CD74P04233 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CD74P04233 CICP4-201ENST00000447359 2812 ntBASIC13.74□□□□□ -0.21
CD74P04233 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CD74P04233 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC13.74□□□□□ -0.21
CD74P04233 GSN-203ENST00000373808 2664 ntTSL 2 BASIC13.74□□□□□ -0.21
CD74P04233 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC13.74□□□□□ -0.21
CD74P04233 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC13.74□□□□□ -0.21
CD74P04233 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CD74P04233 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC13.74□□□□□ -0.21
CD74P04233 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CD74P04233 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
CD74P04233 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
CD74P04233 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CD74P04233 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CD74P04233 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
CD74P04233 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CD74P04233 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
CD74P04233 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
CD74P04233 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC13.74□□□□□ -0.21
CD74P04233 AC005521.1-201ENST00000393351 872 ntBASIC13.74□□□□□ -0.21
CD74P04233 IGHV3-47-201ENST00000425060 335 ntBASIC13.74□□□□□ -0.21
CD74P04233 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CD74P04233 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC13.74□□□□□ -0.21
CD74P04233 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
CD74P04233 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CD74P04233 BX276092.5-203ENST00000456199 560 ntBASIC13.74□□□□□ -0.21
CD74P04233 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC13.74□□□□□ -0.21
CD74P04233 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CD74P04233 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC13.74□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 65.2 ms