Protein–RNA interactions for Protein: P03999

OPN1SW, Short-wave-sensitive opsin 1, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPN1SWP03999 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
OPN1SWP03999 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
OPN1SWP03999 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
OPN1SWP03999 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
OPN1SWP03999 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
OPN1SWP03999 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC15.3■□□□□ 0.04
OPN1SWP03999 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
OPN1SWP03999 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC15.3■□□□□ 0.04
OPN1SWP03999 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC15.3■□□□□ 0.04
OPN1SWP03999 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
OPN1SWP03999 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC15.3■□□□□ 0.04
OPN1SWP03999 SDHD-206ENST00000528182 754 ntTSL 3 BASIC15.3■□□□□ 0.04
OPN1SWP03999 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC15.3■□□□□ 0.04
OPN1SWP03999 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
OPN1SWP03999 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC15.3■□□□□ 0.04
OPN1SWP03999 ETFA-208ENST00000559602 792 ntTSL 3 BASIC15.3■□□□□ 0.04
OPN1SWP03999 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC15.3■□□□□ 0.04
OPN1SWP03999 AL356488.2-201ENST00000602755 427 ntBASIC15.3■□□□□ 0.04
OPN1SWP03999 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC15.3■□□□□ 0.04
OPN1SWP03999 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
OPN1SWP03999 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
OPN1SWP03999 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC15.3■□□□□ 0.04
OPN1SWP03999 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
OPN1SWP03999 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
OPN1SWP03999 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
OPN1SWP03999 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC15.29■□□□□ 0.04
OPN1SWP03999 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC15.29■□□□□ 0.04
OPN1SWP03999 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
OPN1SWP03999 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
OPN1SWP03999 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
OPN1SWP03999 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
OPN1SWP03999 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
OPN1SWP03999 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC15.29■□□□□ 0.04
OPN1SWP03999 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
OPN1SWP03999 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC15.29■□□□□ 0.04
OPN1SWP03999 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC15.29■□□□□ 0.04
OPN1SWP03999 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
OPN1SWP03999 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC15.29■□□□□ 0.04
OPN1SWP03999 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC15.29■□□□□ 0.04
OPN1SWP03999 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
OPN1SWP03999 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
OPN1SWP03999 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
OPN1SWP03999 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
OPN1SWP03999 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
OPN1SWP03999 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
OPN1SWP03999 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
OPN1SWP03999 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
OPN1SWP03999 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
OPN1SWP03999 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
OPN1SWP03999 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
OPN1SWP03999 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
OPN1SWP03999 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
OPN1SWP03999 CENPM-204ENST00000402420 688 ntTSL 5 BASIC15.29■□□□□ 0.04
OPN1SWP03999 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC15.29■□□□□ 0.04
OPN1SWP03999 HNRNPDP1-201ENST00000439535 754 ntBASIC15.29■□□□□ 0.04
OPN1SWP03999 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
OPN1SWP03999 AC108073.2-201ENST00000464002 357 ntBASIC15.29■□□□□ 0.04
OPN1SWP03999 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
OPN1SWP03999 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
OPN1SWP03999 RNPS1P1-201ENST00000507437 918 ntBASIC15.29■□□□□ 0.04
OPN1SWP03999 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC15.29■□□□□ 0.04
OPN1SWP03999 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC15.29■□□□□ 0.04
OPN1SWP03999 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC15.29■□□□□ 0.04
OPN1SWP03999 CIPC-205ENST00000555437 566 ntTSL 3 BASIC15.29■□□□□ 0.04
OPN1SWP03999 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC15.29■□□□□ 0.04
OPN1SWP03999 AC012640.2-201ENST00000561606 901 ntBASIC15.29■□□□□ 0.04
OPN1SWP03999 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC15.29■□□□□ 0.04
OPN1SWP03999 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC15.29■□□□□ 0.04
OPN1SWP03999 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
OPN1SWP03999 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
OPN1SWP03999 AC008735.5-201ENST00000623544 497 ntBASIC15.29■□□□□ 0.04
OPN1SWP03999 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC15.29■□□□□ 0.04
OPN1SWP03999 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
OPN1SWP03999 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
OPN1SWP03999 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
OPN1SWP03999 AC126177.1-201ENST00000547829 2218 ntBASIC15.29■□□□□ 0.04
OPN1SWP03999 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
OPN1SWP03999 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
OPN1SWP03999 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
OPN1SWP03999 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
OPN1SWP03999 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
OPN1SWP03999 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC15.29■□□□□ 0.04
OPN1SWP03999 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
OPN1SWP03999 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
OPN1SWP03999 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
OPN1SWP03999 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
OPN1SWP03999 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
OPN1SWP03999 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC15.29■□□□□ 0.04
OPN1SWP03999 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
OPN1SWP03999 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
OPN1SWP03999 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
OPN1SWP03999 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC15.28■□□□□ 0.04
OPN1SWP03999 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
OPN1SWP03999 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC15.28■□□□□ 0.04
OPN1SWP03999 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
OPN1SWP03999 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
OPN1SWP03999 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
OPN1SWP03999 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC15.28■□□□□ 0.04
OPN1SWP03999 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
OPN1SWP03999 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms