Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC15.48■□□□□ 0.07
MT-ND1P03886 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC15.48■□□□□ 0.07
MT-ND1P03886 AC138894.3-201ENST00000603787 634 ntBASIC15.48■□□□□ 0.07
MT-ND1P03886 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC15.48■□□□□ 0.07
MT-ND1P03886 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC15.48■□□□□ 0.07
MT-ND1P03886 GPAA1P2-202ENST00000606848 1787 ntBASIC15.48■□□□□ 0.07
MT-ND1P03886 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC15.48■□□□□ 0.07
MT-ND1P03886 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC15.48■□□□□ 0.07
MT-ND1P03886 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
MT-ND1P03886 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
MT-ND1P03886 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
MT-ND1P03886 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
MT-ND1P03886 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
MT-ND1P03886 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
MT-ND1P03886 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
MT-ND1P03886 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
MT-ND1P03886 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
MT-ND1P03886 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
MT-ND1P03886 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC15.48■□□□□ 0.07
MT-ND1P03886 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
MT-ND1P03886 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
MT-ND1P03886 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC15.47■□□□□ 0.07
MT-ND1P03886 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC15.47■□□□□ 0.07
MT-ND1P03886 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
MT-ND1P03886 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC15.47■□□□□ 0.07
MT-ND1P03886 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
MT-ND1P03886 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC15.47■□□□□ 0.07
MT-ND1P03886 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC15.47■□□□□ 0.07
MT-ND1P03886 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
MT-ND1P03886 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
MT-ND1P03886 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC15.47■□□□□ 0.07
MT-ND1P03886 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
MT-ND1P03886 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
MT-ND1P03886 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
MT-ND1P03886 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
MT-ND1P03886 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
MT-ND1P03886 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
MT-ND1P03886 AC132008.2-207ENST00000454517 770 ntBASIC15.47■□□□□ 0.07
MT-ND1P03886 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC15.47■□□□□ 0.07
MT-ND1P03886 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
MT-ND1P03886 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC15.47■□□□□ 0.07
MT-ND1P03886 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC15.47■□□□□ 0.07
MT-ND1P03886 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC15.47■□□□□ 0.07
MT-ND1P03886 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC15.47■□□□□ 0.07
MT-ND1P03886 MIR4492-201ENST00000581627 80 ntBASIC15.47■□□□□ 0.07
MT-ND1P03886 MPDU1-223ENST00000582151 728 ntBASIC15.47■□□□□ 0.07
MT-ND1P03886 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
MT-ND1P03886 IGHV3OR16-7-201ENST00000604106 360 ntBASIC15.47■□□□□ 0.07
MT-ND1P03886 AL353135.1-201ENST00000606729 504 ntBASIC15.47■□□□□ 0.07
MT-ND1P03886 AP001269.4-201ENST00000609611 512 ntBASIC15.47■□□□□ 0.07
MT-ND1P03886 AC093458.2-201ENST00000623150 629 ntBASIC15.47■□□□□ 0.07
MT-ND1P03886 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC15.47■□□□□ 0.07
MT-ND1P03886 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
MT-ND1P03886 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC15.47■□□□□ 0.07
MT-ND1P03886 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC15.47■□□□□ 0.07
MT-ND1P03886 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC15.47■□□□□ 0.07
MT-ND1P03886 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC15.47■□□□□ 0.07
MT-ND1P03886 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
MT-ND1P03886 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
MT-ND1P03886 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC15.47■□□□□ 0.07
MT-ND1P03886 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
MT-ND1P03886 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC15.47■□□□□ 0.07
MT-ND1P03886 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC15.47■□□□□ 0.07
MT-ND1P03886 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC15.46■□□□□ 0.07
MT-ND1P03886 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
MT-ND1P03886 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC15.46■□□□□ 0.07
MT-ND1P03886 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
MT-ND1P03886 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
MT-ND1P03886 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
MT-ND1P03886 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC15.46■□□□□ 0.07
MT-ND1P03886 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC15.46■□□□□ 0.07
MT-ND1P03886 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
MT-ND1P03886 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC15.46■□□□□ 0.07
MT-ND1P03886 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
MT-ND1P03886 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
MT-ND1P03886 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC15.46■□□□□ 0.07
MT-ND1P03886 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
MT-ND1P03886 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
MT-ND1P03886 AL161772.1-201ENST00000610494 4412 ntBASIC15.46■□□□□ 0.07
MT-ND1P03886 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
MT-ND1P03886 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
MT-ND1P03886 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
MT-ND1P03886 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
MT-ND1P03886 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
MT-ND1P03886 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
MT-ND1P03886 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
MT-ND1P03886 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
MT-ND1P03886 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
MT-ND1P03886 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
MT-ND1P03886 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC15.46■□□□□ 0.07
MT-ND1P03886 AC106795.1-205ENST00000512851 1056 ntBASIC15.46■□□□□ 0.07
MT-ND1P03886 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC15.46■□□□□ 0.07
MT-ND1P03886 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC15.46■□□□□ 0.07
MT-ND1P03886 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC15.46■□□□□ 0.07
MT-ND1P03886 ABBA01031661.1-201ENST00000634362 1253 ntBASIC15.46■□□□□ 0.07
MT-ND1P03886 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
MT-ND1P03886 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC15.46■□□□□ 0.07
MT-ND1P03886 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC15.46■□□□□ 0.07
MT-ND1P03886 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC15.46■□□□□ 0.07
MT-ND1P03886 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC15.46■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms