Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PDGFBP01127 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PDGFBP01127 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PDGFBP01127 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
PDGFBP01127 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PDGFBP01127 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PDGFBP01127 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PDGFBP01127 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PDGFBP01127 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
PDGFBP01127 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PDGFBP01127 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC16.19■□□□□ 0.18
PDGFBP01127 LINC02012-201ENST00000608206 1725 ntBASIC16.19■□□□□ 0.18
PDGFBP01127 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC16.19■□□□□ 0.18
PDGFBP01127 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC16.19■□□□□ 0.18
PDGFBP01127 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PDGFBP01127 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PDGFBP01127 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PDGFBP01127 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PDGFBP01127 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PDGFBP01127 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
PDGFBP01127 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PDGFBP01127 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PDGFBP01127 AL354751.1-201ENST00000412768 1863 ntBASIC16.19■□□□□ 0.18
PDGFBP01127 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PDGFBP01127 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
PDGFBP01127 KRT8P19-201ENST00000551916 1455 ntBASIC16.19■□□□□ 0.18
PDGFBP01127 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC16.19■□□□□ 0.18
PDGFBP01127 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PDGFBP01127 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC16.19■□□□□ 0.18
PDGFBP01127 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC16.19■□□□□ 0.18
PDGFBP01127 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC16.19■□□□□ 0.18
PDGFBP01127 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC16.19■□□□□ 0.18
PDGFBP01127 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC16.19■□□□□ 0.18
PDGFBP01127 AP006547.1-201ENST00000563435 692 ntBASIC16.19■□□□□ 0.18
PDGFBP01127 AP001063.1-201ENST00000568332 529 ntBASIC16.19■□□□□ 0.18
PDGFBP01127 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC16.19■□□□□ 0.18
PDGFBP01127 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PDGFBP01127 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC16.19■□□□□ 0.18
PDGFBP01127 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC16.19■□□□□ 0.18
PDGFBP01127 METTL26-214ENST00000614890 801 ntTSL 3 BASIC16.19■□□□□ 0.18
PDGFBP01127 LARP4-220ENST00000615080 856 ntTSL 5 BASIC16.19■□□□□ 0.18
PDGFBP01127 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC16.19■□□□□ 0.18
PDGFBP01127 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
PDGFBP01127 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
PDGFBP01127 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
PDGFBP01127 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PDGFBP01127 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PDGFBP01127 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PDGFBP01127 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PDGFBP01127 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PDGFBP01127 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PDGFBP01127 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PDGFBP01127 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
PDGFBP01127 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
PDGFBP01127 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC16.18■□□□□ 0.18
PDGFBP01127 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
PDGFBP01127 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PDGFBP01127 GPAA1P2-202ENST00000606848 1787 ntBASIC16.18■□□□□ 0.18
PDGFBP01127 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PDGFBP01127 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC16.18■□□□□ 0.18
PDGFBP01127 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PDGFBP01127 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC16.18■□□□□ 0.18
PDGFBP01127 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC16.18■□□□□ 0.18
PDGFBP01127 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
PDGFBP01127 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PDGFBP01127 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PDGFBP01127 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC16.18■□□□□ 0.18
PDGFBP01127 CNN2P8-201ENST00000421872 913 ntBASIC16.18■□□□□ 0.18
PDGFBP01127 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
PDGFBP01127 C2orf27AP3-201ENST00000434123 579 ntBASIC16.18■□□□□ 0.18
PDGFBP01127 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PDGFBP01127 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC16.18■□□□□ 0.18
PDGFBP01127 TSACC-208ENST00000481479 741 ntTSL 2 BASIC16.18■□□□□ 0.18
PDGFBP01127 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
PDGFBP01127 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PDGFBP01127 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PDGFBP01127 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC16.18■□□□□ 0.18
PDGFBP01127 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC16.18■□□□□ 0.18
PDGFBP01127 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
PDGFBP01127 AL354718.3-201ENST00000616414 581 ntBASIC16.18■□□□□ 0.18
PDGFBP01127 CR382287.1-201ENST00000623954 586 ntBASIC16.18■□□□□ 0.18
PDGFBP01127 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PDGFBP01127 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PDGFBP01127 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC16.18■□□□□ 0.18
PDGFBP01127 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PDGFBP01127 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PDGFBP01127 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PDGFBP01127 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PDGFBP01127 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PDGFBP01127 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
PDGFBP01127 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PDGFBP01127 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PDGFBP01127 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PDGFBP01127 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PDGFBP01127 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
PDGFBP01127 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC16.17■□□□□ 0.18
PDGFBP01127 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PDGFBP01127 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC16.17■□□□□ 0.18
PDGFBP01127 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC16.17■□□□□ 0.18
PDGFBP01127 BICD1-207ENST00000551848 1962 ntBASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms