Protein–RNA interactions for Protein: O96006

ZBED1, Zinc finger BED domain-containing protein 1, humanhuman

Predictions only

Length 694 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZBED1O96006 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ZBED1O96006 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ZBED1O96006 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ZBED1O96006 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ZBED1O96006 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC17.28■□□□□ 0.36
ZBED1O96006 FAM58DP-201ENST00000428076 619 ntBASIC17.28■□□□□ 0.36
ZBED1O96006 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
ZBED1O96006 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
ZBED1O96006 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC17.28■□□□□ 0.36
ZBED1O96006 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC17.28■□□□□ 0.36
ZBED1O96006 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC17.28■□□□□ 0.36
ZBED1O96006 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC17.28■□□□□ 0.36
ZBED1O96006 AC009093.7-201ENST00000623853 1223 ntBASIC17.28■□□□□ 0.36
ZBED1O96006 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC17.28■□□□□ 0.36
ZBED1O96006 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC17.28■□□□□ 0.36
ZBED1O96006 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC17.28■□□□□ 0.36
ZBED1O96006 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
ZBED1O96006 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
ZBED1O96006 AC092364.2-201ENST00000596710 2692 ntBASIC17.28■□□□□ 0.36
ZBED1O96006 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
ZBED1O96006 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC17.28■□□□□ 0.36
ZBED1O96006 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
ZBED1O96006 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ZBED1O96006 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
ZBED1O96006 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ZBED1O96006 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
ZBED1O96006 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC17.28■□□□□ 0.36
ZBED1O96006 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ZBED1O96006 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
ZBED1O96006 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ZBED1O96006 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC17.27■□□□□ 0.36
ZBED1O96006 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC17.27■□□□□ 0.36
ZBED1O96006 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ZBED1O96006 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
ZBED1O96006 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC17.27■□□□□ 0.36
ZBED1O96006 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ZBED1O96006 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC17.27■□□□□ 0.36
ZBED1O96006 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
ZBED1O96006 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
ZBED1O96006 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ZBED1O96006 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ZBED1O96006 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
ZBED1O96006 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC17.27■□□□□ 0.36
ZBED1O96006 CBR1-202ENST00000399191 838 ntTSL 3 BASIC17.27■□□□□ 0.36
ZBED1O96006 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC17.27■□□□□ 0.36
ZBED1O96006 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC17.27■□□□□ 0.36
ZBED1O96006 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC17.27■□□□□ 0.36
ZBED1O96006 AC093724.1-201ENST00000448659 1027 ntBASIC17.27■□□□□ 0.36
ZBED1O96006 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC17.27■□□□□ 0.36
ZBED1O96006 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC17.27■□□□□ 0.36
ZBED1O96006 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ZBED1O96006 SLC25A39P2-201ENST00000537614 270 ntBASIC17.27■□□□□ 0.36
ZBED1O96006 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC17.27■□□□□ 0.36
ZBED1O96006 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC17.27■□□□□ 0.36
ZBED1O96006 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC17.27■□□□□ 0.36
ZBED1O96006 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC17.27■□□□□ 0.36
ZBED1O96006 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
ZBED1O96006 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
ZBED1O96006 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
ZBED1O96006 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
ZBED1O96006 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.35
ZBED1O96006 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
ZBED1O96006 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
ZBED1O96006 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
ZBED1O96006 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ZBED1O96006 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC17.26■□□□□ 0.35
ZBED1O96006 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
ZBED1O96006 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ZBED1O96006 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ZBED1O96006 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
ZBED1O96006 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ZBED1O96006 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
ZBED1O96006 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC17.26■□□□□ 0.35
ZBED1O96006 KRT18P28-201ENST00000453838 1332 ntBASIC17.26■□□□□ 0.35
ZBED1O96006 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC17.26■□□□□ 0.35
ZBED1O96006 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC17.26■□□□□ 0.35
ZBED1O96006 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ZBED1O96006 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ZBED1O96006 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ZBED1O96006 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ZBED1O96006 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC17.26■□□□□ 0.35
ZBED1O96006 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ZBED1O96006 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC17.26■□□□□ 0.35
ZBED1O96006 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC17.26■□□□□ 0.35
ZBED1O96006 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
ZBED1O96006 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
ZBED1O96006 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ZBED1O96006 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
ZBED1O96006 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC17.26■□□□□ 0.35
ZBED1O96006 AC142381.1-201ENST00000426099 345 ntBASIC17.26■□□□□ 0.35
ZBED1O96006 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ZBED1O96006 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ZBED1O96006 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC17.26■□□□□ 0.35
ZBED1O96006 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC17.26■□□□□ 0.35
ZBED1O96006 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ZBED1O96006 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC17.26■□□□□ 0.35
ZBED1O96006 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
ZBED1O96006 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
ZBED1O96006 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
ZBED1O96006 CYP2T1P-202ENST00000641596 2535 ntBASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms