Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SIX6O95475 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
SIX6O95475 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC13.73□□□□□ -0.21
SIX6O95475 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SIX6O95475 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC13.73□□□□□ -0.21
SIX6O95475 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SIX6O95475 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SIX6O95475 AC005912.2-201ENST00000619492 2400 ntBASIC13.73□□□□□ -0.21
SIX6O95475 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SIX6O95475 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SIX6O95475 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SIX6O95475 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SIX6O95475 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
SIX6O95475 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC13.73□□□□□ -0.21
SIX6O95475 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SIX6O95475 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
SIX6O95475 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SIX6O95475 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC13.73□□□□□ -0.21
SIX6O95475 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SIX6O95475 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
SIX6O95475 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SIX6O95475 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC13.73□□□□□ -0.21
SIX6O95475 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SIX6O95475 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC13.73□□□□□ -0.21
SIX6O95475 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
SIX6O95475 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SIX6O95475 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
SIX6O95475 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SIX6O95475 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
SIX6O95475 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC13.72□□□□□ -0.21
SIX6O95475 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SIX6O95475 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SIX6O95475 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC13.72□□□□□ -0.21
SIX6O95475 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SIX6O95475 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SIX6O95475 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC13.72□□□□□ -0.21
SIX6O95475 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SIX6O95475 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SIX6O95475 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC13.72□□□□□ -0.21
SIX6O95475 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SIX6O95475 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SIX6O95475 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SIX6O95475 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SIX6O95475 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SIX6O95475 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SIX6O95475 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SIX6O95475 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC13.72□□□□□ -0.21
SIX6O95475 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
SIX6O95475 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC13.72□□□□□ -0.21
SIX6O95475 MIR1238-201ENST00000408483 83 ntBASIC13.72□□□□□ -0.21
SIX6O95475 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SIX6O95475 POU5F1P6-201ENST00000466990 990 ntBASIC13.72□□□□□ -0.21
SIX6O95475 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC13.72□□□□□ -0.21
SIX6O95475 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC13.72□□□□□ -0.21
SIX6O95475 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC13.72□□□□□ -0.21
SIX6O95475 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC13.72□□□□□ -0.21
SIX6O95475 NAA38-203ENST00000575071 553 ntTSL 2 BASIC13.72□□□□□ -0.21
SIX6O95475 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC13.72□□□□□ -0.21
SIX6O95475 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC13.72□□□□□ -0.21
SIX6O95475 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC13.72□□□□□ -0.21
SIX6O95475 AL049637.2-201ENST00000641778 930 ntBASIC13.72□□□□□ -0.21
SIX6O95475 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SIX6O95475 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SIX6O95475 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SIX6O95475 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC13.72□□□□□ -0.21
SIX6O95475 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SIX6O95475 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
SIX6O95475 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
SIX6O95475 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC13.72□□□□□ -0.21
SIX6O95475 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SIX6O95475 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC13.72□□□□□ -0.21
SIX6O95475 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
SIX6O95475 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
SIX6O95475 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SIX6O95475 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SIX6O95475 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
SIX6O95475 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
SIX6O95475 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
SIX6O95475 PCGF3-213ENST00000620529 1899 ntBASIC13.72□□□□□ -0.21
SIX6O95475 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
SIX6O95475 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC13.72□□□□□ -0.21
SIX6O95475 AC232323.1-201ENST00000540724 2099 ntBASIC13.71□□□□□ -0.21
SIX6O95475 REXO1L5P-201ENST00000622260 2098 ntBASIC13.71□□□□□ -0.21
SIX6O95475 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
SIX6O95475 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
SIX6O95475 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SIX6O95475 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SIX6O95475 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
SIX6O95475 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
SIX6O95475 AC132938.5-201ENST00000624980 1813 ntBASIC13.71□□□□□ -0.21
SIX6O95475 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
SIX6O95475 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC13.71□□□□□ -0.21
SIX6O95475 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
SIX6O95475 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
SIX6O95475 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC13.71□□□□□ -0.21
SIX6O95475 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SIX6O95475 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC13.71□□□□□ -0.21
SIX6O95475 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC13.71□□□□□ -0.21
SIX6O95475 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC13.71□□□□□ -0.21
SIX6O95475 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 75.3 ms