Protein–RNA interactions for Protein: O95196

CSPG5, Chondroitin sulfate proteoglycan 5, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5O95196 FAM220BP-201ENST00000377689 816 ntBASIC17.52■□□□□ 0.4
CSPG5O95196 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CSPG5O95196 RASL12-203ENST00000434605 982 ntTSL 2 BASIC17.52■□□□□ 0.4
CSPG5O95196 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC17.52■□□□□ 0.4
CSPG5O95196 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC17.52■□□□□ 0.4
CSPG5O95196 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC17.52■□□□□ 0.4
CSPG5O95196 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC17.52■□□□□ 0.4
CSPG5O95196 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC17.52■□□□□ 0.4
CSPG5O95196 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CSPG5O95196 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
CSPG5O95196 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
CSPG5O95196 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC17.52■□□□□ 0.4
CSPG5O95196 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC17.52■□□□□ 0.4
CSPG5O95196 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC17.52■□□□□ 0.4
CSPG5O95196 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CSPG5O95196 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CSPG5O95196 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
CSPG5O95196 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CSPG5O95196 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CSPG5O95196 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CSPG5O95196 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CSPG5O95196 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC17.52■□□□□ 0.39
CSPG5O95196 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CSPG5O95196 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC17.52■□□□□ 0.39
CSPG5O95196 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CSPG5O95196 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
CSPG5O95196 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CSPG5O95196 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
CSPG5O95196 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CSPG5O95196 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
CSPG5O95196 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC17.51■□□□□ 0.39
CSPG5O95196 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC17.51■□□□□ 0.39
CSPG5O95196 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CSPG5O95196 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC17.51■□□□□ 0.39
CSPG5O95196 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
CSPG5O95196 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
CSPG5O95196 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CSPG5O95196 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CSPG5O95196 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC17.51■□□□□ 0.39
CSPG5O95196 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CSPG5O95196 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
CSPG5O95196 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CSPG5O95196 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CSPG5O95196 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CSPG5O95196 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CSPG5O95196 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
CSPG5O95196 AC079776.1-201ENST00000401540 1152 ntBASIC17.51■□□□□ 0.39
CSPG5O95196 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC17.51■□□□□ 0.39
CSPG5O95196 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC17.51■□□□□ 0.39
CSPG5O95196 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CSPG5O95196 AC011495.1-201ENST00000498085 584 ntBASIC17.51■□□□□ 0.39
CSPG5O95196 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC17.51■□□□□ 0.39
CSPG5O95196 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC17.51■□□□□ 0.39
CSPG5O95196 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC17.51■□□□□ 0.39
CSPG5O95196 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC17.51■□□□□ 0.39
CSPG5O95196 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CSPG5O95196 MIR6805-201ENST00000615055 62 ntBASIC17.51■□□□□ 0.39
CSPG5O95196 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CSPG5O95196 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CSPG5O95196 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CSPG5O95196 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC17.51■□□□□ 0.39
CSPG5O95196 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CSPG5O95196 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC17.51■□□□□ 0.39
CSPG5O95196 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC17.51■□□□□ 0.39
CSPG5O95196 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CSPG5O95196 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC17.51■□□□□ 0.39
CSPG5O95196 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CSPG5O95196 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
CSPG5O95196 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CSPG5O95196 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC17.5■□□□□ 0.39
CSPG5O95196 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
CSPG5O95196 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
CSPG5O95196 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CSPG5O95196 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
CSPG5O95196 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
CSPG5O95196 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CSPG5O95196 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CSPG5O95196 CROCCP2-202ENST00000412962 2773 ntBASIC17.5■□□□□ 0.39
CSPG5O95196 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC17.5■□□□□ 0.39
CSPG5O95196 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CSPG5O95196 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CSPG5O95196 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CSPG5O95196 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
CSPG5O95196 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CSPG5O95196 WDR53-204ENST00000433160 887 ntTSL 5 BASIC17.5■□□□□ 0.39
CSPG5O95196 TTTY23B-201ENST00000442790 549 ntBASIC17.5■□□□□ 0.39
CSPG5O95196 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC17.5■□□□□ 0.39
CSPG5O95196 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
CSPG5O95196 Six3os1_5.1-201ENST00000611000 271 ntBASIC17.5■□□□□ 0.39
CSPG5O95196 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC17.5■□□□□ 0.39
CSPG5O95196 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CSPG5O95196 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CSPG5O95196 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CSPG5O95196 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
CSPG5O95196 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CSPG5O95196 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CSPG5O95196 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
CSPG5O95196 BOC-212ENST00000485230 2173 ntTSL 2 BASIC17.49■□□□□ 0.39
CSPG5O95196 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC17.49■□□□□ 0.39
CSPG5O95196 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms