Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
CTNND1O60716 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CTNND1O60716 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CTNND1O60716 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
CTNND1O60716 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
CTNND1O60716 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
CTNND1O60716 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
CTNND1O60716 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC18.95■□□□□ 0.62
CTNND1O60716 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CTNND1O60716 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC18.95■□□□□ 0.62
CTNND1O60716 TTTY23B-201ENST00000442790 549 ntBASIC18.95■□□□□ 0.62
CTNND1O60716 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC18.95■□□□□ 0.62
CTNND1O60716 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC18.95■□□□□ 0.62
CTNND1O60716 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC18.95■□□□□ 0.62
CTNND1O60716 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC18.95■□□□□ 0.62
CTNND1O60716 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC18.95■□□□□ 0.62
CTNND1O60716 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC18.95■□□□□ 0.62
CTNND1O60716 FUZ-207ENST00000526575 482 ntTSL 4 BASIC18.95■□□□□ 0.62
CTNND1O60716 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC18.95■□□□□ 0.62
CTNND1O60716 RAB43P1-201ENST00000561790 589 ntBASIC18.95■□□□□ 0.62
CTNND1O60716 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC18.95■□□□□ 0.62
CTNND1O60716 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC18.95■□□□□ 0.62
CTNND1O60716 TMEM261P1-201ENST00000604899 340 ntBASIC18.95■□□□□ 0.62
CTNND1O60716 MIR6805-201ENST00000615055 62 ntBASIC18.95■□□□□ 0.62
CTNND1O60716 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC18.95■□□□□ 0.62
CTNND1O60716 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC18.95■□□□□ 0.62
CTNND1O60716 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CTNND1O60716 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC18.95■□□□□ 0.62
CTNND1O60716 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC18.95■□□□□ 0.62
CTNND1O60716 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CTNND1O60716 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CTNND1O60716 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CTNND1O60716 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CTNND1O60716 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CTNND1O60716 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC18.95■□□□□ 0.62
CTNND1O60716 HR-201ENST00000312841 5351 ntTSL 5 BASIC18.95■□□□□ 0.62
CTNND1O60716 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CTNND1O60716 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC18.95■□□□□ 0.62
CTNND1O60716 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC18.94■□□□□ 0.62
CTNND1O60716 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CTNND1O60716 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CTNND1O60716 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
CTNND1O60716 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CTNND1O60716 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC18.94■□□□□ 0.62
CTNND1O60716 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CTNND1O60716 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CTNND1O60716 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CTNND1O60716 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
CTNND1O60716 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CTNND1O60716 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
CTNND1O60716 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CTNND1O60716 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC18.94■□□□□ 0.62
CTNND1O60716 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC18.94■□□□□ 0.62
CTNND1O60716 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC18.94■□□□□ 0.62
CTNND1O60716 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC18.94■□□□□ 0.62
CTNND1O60716 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
CTNND1O60716 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
CTNND1O60716 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC18.94■□□□□ 0.62
CTNND1O60716 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC18.94■□□□□ 0.62
CTNND1O60716 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CTNND1O60716 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CTNND1O60716 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CTNND1O60716 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CTNND1O60716 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
CTNND1O60716 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CTNND1O60716 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC18.94■□□□□ 0.62
CTNND1O60716 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
CTNND1O60716 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC18.93■□□□□ 0.62
CTNND1O60716 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CTNND1O60716 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
CTNND1O60716 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CTNND1O60716 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
CTNND1O60716 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC18.93■□□□□ 0.62
CTNND1O60716 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CTNND1O60716 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
CTNND1O60716 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CTNND1O60716 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CTNND1O60716 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CTNND1O60716 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CTNND1O60716 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CTNND1O60716 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CTNND1O60716 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CTNND1O60716 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
CTNND1O60716 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CTNND1O60716 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CTNND1O60716 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC18.93■□□□□ 0.62
CTNND1O60716 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CTNND1O60716 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CTNND1O60716 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CTNND1O60716 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC18.93■□□□□ 0.62
CTNND1O60716 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC18.93■□□□□ 0.62
CTNND1O60716 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC18.93■□□□□ 0.62
CTNND1O60716 RARRES2P5-201ENST00000564013 466 ntBASIC18.93■□□□□ 0.62
CTNND1O60716 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
CTNND1O60716 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CTNND1O60716 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CTNND1O60716 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
CTNND1O60716 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
CTNND1O60716 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CTNND1O60716 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms