Protein–RNA interactions for Protein: O43812

DUX1, Double homeobox protein 1, humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX1O43812 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
DUX1O43812 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
DUX1O43812 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC15.58■□□□□ 0.08
DUX1O43812 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
DUX1O43812 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
DUX1O43812 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
DUX1O43812 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
DUX1O43812 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
DUX1O43812 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
DUX1O43812 AC007541.1-201ENST00000570282 1469 ntBASIC15.58■□□□□ 0.08
DUX1O43812 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
DUX1O43812 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
DUX1O43812 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
DUX1O43812 NFIC-211ENST00000641145 8399 ntBASIC15.58■□□□□ 0.08
DUX1O43812 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
DUX1O43812 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
DUX1O43812 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
DUX1O43812 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC15.57■□□□□ 0.08
DUX1O43812 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
DUX1O43812 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC15.57■□□□□ 0.08
DUX1O43812 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
DUX1O43812 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
DUX1O43812 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
DUX1O43812 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
DUX1O43812 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
DUX1O43812 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
DUX1O43812 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
DUX1O43812 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
DUX1O43812 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
DUX1O43812 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC15.57■□□□□ 0.08
DUX1O43812 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC15.57■□□□□ 0.08
DUX1O43812 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC15.57■□□□□ 0.08
DUX1O43812 RN7SL692P-201ENST00000464677 288 ntBASIC15.57■□□□□ 0.08
DUX1O43812 SDHAP3-202ENST00000515467 728 ntBASIC15.57■□□□□ 0.08
DUX1O43812 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC15.57■□□□□ 0.08
DUX1O43812 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
DUX1O43812 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC15.57■□□□□ 0.08
DUX1O43812 AC044860.1-202ENST00000559481 777 ntBASIC15.57■□□□□ 0.08
DUX1O43812 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC15.57■□□□□ 0.08
DUX1O43812 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC15.57■□□□□ 0.08
DUX1O43812 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
DUX1O43812 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC15.57■□□□□ 0.08
DUX1O43812 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC15.57■□□□□ 0.08
DUX1O43812 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
DUX1O43812 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
DUX1O43812 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
DUX1O43812 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
DUX1O43812 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC15.57■□□□□ 0.08
DUX1O43812 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
DUX1O43812 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
DUX1O43812 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC15.57■□□□□ 0.08
DUX1O43812 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
DUX1O43812 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC15.57■□□□□ 0.08
DUX1O43812 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
DUX1O43812 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC15.57■□□□□ 0.08
DUX1O43812 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
DUX1O43812 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC15.56■□□□□ 0.08
DUX1O43812 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
DUX1O43812 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
DUX1O43812 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
DUX1O43812 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
DUX1O43812 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC15.56■□□□□ 0.08
DUX1O43812 UBALD1-205ENST00000590891 2641 ntBASIC15.56■□□□□ 0.08
DUX1O43812 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
DUX1O43812 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
DUX1O43812 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
DUX1O43812 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
DUX1O43812 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
DUX1O43812 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC15.56■□□□□ 0.08
DUX1O43812 DFFBP1-201ENST00000433250 979 ntBASIC15.56■□□□□ 0.08
DUX1O43812 AL353779.1-201ENST00000434793 351 ntBASIC15.56■□□□□ 0.08
DUX1O43812 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC15.56■□□□□ 0.08
DUX1O43812 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC15.56■□□□□ 0.08
DUX1O43812 MEIS3P1-201ENST00000495167 958 ntBASIC15.56■□□□□ 0.08
DUX1O43812 AC093004.1-201ENST00000508850 424 ntBASIC15.56■□□□□ 0.08
DUX1O43812 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
DUX1O43812 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
DUX1O43812 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC15.56■□□□□ 0.08
DUX1O43812 AC140912.1-201ENST00000577171 1054 ntBASIC15.56■□□□□ 0.08
DUX1O43812 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC15.56■□□□□ 0.08
DUX1O43812 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC15.56■□□□□ 0.08
DUX1O43812 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
DUX1O43812 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC15.56■□□□□ 0.08
DUX1O43812 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC15.56■□□□□ 0.08
DUX1O43812 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
DUX1O43812 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC15.56■□□□□ 0.08
DUX1O43812 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC15.56■□□□□ 0.08
DUX1O43812 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
DUX1O43812 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
DUX1O43812 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
DUX1O43812 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
DUX1O43812 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
DUX1O43812 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
DUX1O43812 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
DUX1O43812 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
DUX1O43812 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC15.55■□□□□ 0.08
DUX1O43812 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC15.55■□□□□ 0.08
DUX1O43812 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
DUX1O43812 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
DUX1O43812 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC15.55■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms