Protein–RNA interactions for Protein: O43623

SNAI2, Zinc finger protein SNAI2, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI2O43623 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SNAI2O43623 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
SNAI2O43623 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SNAI2O43623 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC12.3□□□□□ -0.44
SNAI2O43623 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SNAI2O43623 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SNAI2O43623 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC12.3□□□□□ -0.44
SNAI2O43623 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
SNAI2O43623 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SNAI2O43623 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC12.3□□□□□ -0.44
SNAI2O43623 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
SNAI2O43623 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
SNAI2O43623 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
SNAI2O43623 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SNAI2O43623 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SNAI2O43623 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC12.29□□□□□ -0.44
SNAI2O43623 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC12.29□□□□□ -0.44
SNAI2O43623 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SNAI2O43623 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
SNAI2O43623 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC12.29□□□□□ -0.44
SNAI2O43623 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC12.29□□□□□ -0.44
SNAI2O43623 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SNAI2O43623 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
SNAI2O43623 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
SNAI2O43623 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SNAI2O43623 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SNAI2O43623 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SNAI2O43623 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SNAI2O43623 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
SNAI2O43623 TP73-AS1-210ENST00000637775 1455 ntBASIC12.29□□□□□ -0.44
SNAI2O43623 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
SNAI2O43623 GGT4P-201ENST00000623672 1708 ntBASIC12.29□□□□□ -0.44
SNAI2O43623 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SNAI2O43623 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
SNAI2O43623 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
SNAI2O43623 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SNAI2O43623 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SNAI2O43623 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SNAI2O43623 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC12.29□□□□□ -0.44
SNAI2O43623 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
SNAI2O43623 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SNAI2O43623 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SNAI2O43623 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SNAI2O43623 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
SNAI2O43623 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC12.29□□□□□ -0.44
SNAI2O43623 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SNAI2O43623 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC12.29□□□□□ -0.44
SNAI2O43623 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC12.29□□□□□ -0.44
SNAI2O43623 AL596275.1-201ENST00000423464 877 ntBASIC12.29□□□□□ -0.44
SNAI2O43623 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
SNAI2O43623 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC12.29□□□□□ -0.44
SNAI2O43623 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
SNAI2O43623 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC12.29□□□□□ -0.44
SNAI2O43623 SRP19-202ENST00000445150 833 ntTSL 2 BASIC12.29□□□□□ -0.44
SNAI2O43623 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
SNAI2O43623 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC12.29□□□□□ -0.44
SNAI2O43623 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC12.29□□□□□ -0.44
SNAI2O43623 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC12.29□□□□□ -0.44
SNAI2O43623 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC12.29□□□□□ -0.44
SNAI2O43623 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC12.29□□□□□ -0.44
SNAI2O43623 ABBA01031661.1-201ENST00000634362 1253 ntBASIC12.29□□□□□ -0.44
SNAI2O43623 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SNAI2O43623 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC12.29□□□□□ -0.44
SNAI2O43623 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SNAI2O43623 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SNAI2O43623 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC12.29□□□□□ -0.44
SNAI2O43623 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SNAI2O43623 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC12.29□□□□□ -0.44
SNAI2O43623 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
SNAI2O43623 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
SNAI2O43623 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC12.29□□□□□ -0.44
SNAI2O43623 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC12.29□□□□□ -0.44
SNAI2O43623 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC12.29□□□□□ -0.44
SNAI2O43623 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SNAI2O43623 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
SNAI2O43623 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC12.29□□□□□ -0.44
SNAI2O43623 INTS4P1-201ENST00000438455 1935 ntBASIC12.29□□□□□ -0.44
SNAI2O43623 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC12.29□□□□□ -0.44
SNAI2O43623 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
SNAI2O43623 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SNAI2O43623 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC12.29□□□□□ -0.44
SNAI2O43623 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC12.28□□□□□ -0.44
SNAI2O43623 AC006449.6-201ENST00000612330 2296 ntBASIC12.28□□□□□ -0.44
SNAI2O43623 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SNAI2O43623 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC12.28□□□□□ -0.44
SNAI2O43623 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
SNAI2O43623 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC12.28□□□□□ -0.44
SNAI2O43623 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
SNAI2O43623 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SNAI2O43623 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SNAI2O43623 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC12.28□□□□□ -0.44
SNAI2O43623 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
SNAI2O43623 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC12.28□□□□□ -0.44
SNAI2O43623 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC12.28□□□□□ -0.44
SNAI2O43623 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SNAI2O43623 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SNAI2O43623 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
SNAI2O43623 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC12.28□□□□□ -0.44
SNAI2O43623 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
SNAI2O43623 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC12.28□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms