Protein–RNA interactions for Protein: O14815

CAPN9, Calpain-9, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9O14815 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CAPN9O14815 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC17.29■□□□□ 0.36
CAPN9O14815 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CAPN9O14815 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CAPN9O14815 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
CAPN9O14815 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CAPN9O14815 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC17.29■□□□□ 0.36
CAPN9O14815 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC17.29■□□□□ 0.36
CAPN9O14815 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC17.29■□□□□ 0.36
CAPN9O14815 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC17.29■□□□□ 0.36
CAPN9O14815 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC17.29■□□□□ 0.36
CAPN9O14815 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC17.29■□□□□ 0.36
CAPN9O14815 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CAPN9O14815 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
CAPN9O14815 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CAPN9O14815 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CAPN9O14815 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
CAPN9O14815 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
CAPN9O14815 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
CAPN9O14815 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CAPN9O14815 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC17.29■□□□□ 0.36
CAPN9O14815 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CAPN9O14815 LINC01144-201ENST00000626198 1710 ntBASIC17.29■□□□□ 0.36
CAPN9O14815 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CAPN9O14815 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CAPN9O14815 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
CAPN9O14815 ALOX12P2-203ENST00000570921 1945 ntBASIC17.29■□□□□ 0.36
CAPN9O14815 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC17.29■□□□□ 0.36
CAPN9O14815 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CAPN9O14815 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
CAPN9O14815 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CAPN9O14815 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC17.29■□□□□ 0.36
CAPN9O14815 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC17.29■□□□□ 0.36
CAPN9O14815 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CAPN9O14815 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CAPN9O14815 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CAPN9O14815 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC17.28■□□□□ 0.36
CAPN9O14815 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC17.28■□□□□ 0.36
CAPN9O14815 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CAPN9O14815 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CAPN9O14815 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
CAPN9O14815 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
CAPN9O14815 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC17.28■□□□□ 0.36
CAPN9O14815 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CAPN9O14815 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CAPN9O14815 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CAPN9O14815 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CAPN9O14815 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CAPN9O14815 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
CAPN9O14815 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CAPN9O14815 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
CAPN9O14815 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
CAPN9O14815 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
CAPN9O14815 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CAPN9O14815 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC17.28■□□□□ 0.36
CAPN9O14815 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC17.28■□□□□ 0.36
CAPN9O14815 ADH5P3-201ENST00000433842 1137 ntBASIC17.28■□□□□ 0.36
CAPN9O14815 URGCP-206ENST00000446958 365 ntTSL 2 BASIC17.28■□□□□ 0.36
CAPN9O14815 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CAPN9O14815 CFL1-212ENST00000531413 636 ntTSL 3 BASIC17.28■□□□□ 0.36
CAPN9O14815 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC17.28■□□□□ 0.36
CAPN9O14815 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC17.28■□□□□ 0.36
CAPN9O14815 AC055717.3-201ENST00000622967 595 ntBASIC17.28■□□□□ 0.36
CAPN9O14815 AC134684.3-201ENST00000641758 218 ntBASIC17.28■□□□□ 0.36
CAPN9O14815 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
CAPN9O14815 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
CAPN9O14815 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC17.28■□□□□ 0.36
CAPN9O14815 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CAPN9O14815 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CAPN9O14815 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC17.28■□□□□ 0.36
CAPN9O14815 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CAPN9O14815 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CAPN9O14815 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CAPN9O14815 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CAPN9O14815 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
CAPN9O14815 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CAPN9O14815 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CAPN9O14815 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC17.28■□□□□ 0.36
CAPN9O14815 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
CAPN9O14815 PKD1P5-201ENST00000532415 10291 ntBASIC17.27■□□□□ 0.36
CAPN9O14815 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CAPN9O14815 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CAPN9O14815 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CAPN9O14815 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC17.27■□□□□ 0.36
CAPN9O14815 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC17.27■□□□□ 0.36
CAPN9O14815 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC17.27■□□□□ 0.36
CAPN9O14815 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC17.27■□□□□ 0.36
CAPN9O14815 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
CAPN9O14815 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.36
CAPN9O14815 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CAPN9O14815 NARF-206ENST00000457415 1668 ntTSL 5 BASIC17.27■□□□□ 0.36
CAPN9O14815 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CAPN9O14815 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
CAPN9O14815 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CAPN9O14815 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CAPN9O14815 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CAPN9O14815 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CAPN9O14815 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC17.27■□□□□ 0.36
CAPN9O14815 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CAPN9O14815 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms