Protein–RNA interactions for Protein: O00634

NTN3, Netrin-3, humanhuman

Predicted RBP Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NTN3O00634 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
NTN3O00634 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC15.27■□□□□ 0.04
NTN3O00634 HNRNPA1P48-201ENST00000562726 1377 ntBASIC15.27■□□□□ 0.04
NTN3O00634 AC018665.1-201ENST00000622927 1362 ntBASIC15.27■□□□□ 0.04
NTN3O00634 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
NTN3O00634 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
NTN3O00634 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
NTN3O00634 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
NTN3O00634 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
NTN3O00634 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
NTN3O00634 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC15.27■□□□□ 0.04
NTN3O00634 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC15.27■□□□□ 0.04
NTN3O00634 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC15.27■□□□□ 0.04
NTN3O00634 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC15.27■□□□□ 0.04
NTN3O00634 FAM86LP-201ENST00000478302 853 ntBASIC15.27■□□□□ 0.04
NTN3O00634 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC15.27■□□□□ 0.04
NTN3O00634 SLC25A47P1-201ENST00000531577 414 ntBASIC15.27■□□□□ 0.04
NTN3O00634 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
NTN3O00634 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC15.27■□□□□ 0.04
NTN3O00634 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC15.27■□□□□ 0.04
NTN3O00634 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC15.27■□□□□ 0.04
NTN3O00634 MIR5189-201ENST00000577370 114 ntBASIC15.27■□□□□ 0.04
NTN3O00634 CU634019.7-201ENST00000624153 1185 ntBASIC15.27■□□□□ 0.04
NTN3O00634 FP236241.2-201ENST00000624906 1185 ntBASIC15.27■□□□□ 0.04
NTN3O00634 PFAS-212ENST00000625942 396 ntTSL 5 BASIC15.27■□□□□ 0.04
NTN3O00634 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
NTN3O00634 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC15.27■□□□□ 0.03
NTN3O00634 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
NTN3O00634 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC15.27■□□□□ 0.03
NTN3O00634 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC15.27■□□□□ 0.03
NTN3O00634 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
NTN3O00634 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
NTN3O00634 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
NTN3O00634 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
NTN3O00634 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NTN3O00634 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NTN3O00634 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
NTN3O00634 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
NTN3O00634 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NTN3O00634 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NTN3O00634 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
NTN3O00634 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NTN3O00634 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NTN3O00634 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
NTN3O00634 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC15.26■□□□□ 0.03
NTN3O00634 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
NTN3O00634 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
NTN3O00634 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC15.26■□□□□ 0.03
NTN3O00634 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC15.26■□□□□ 0.03
NTN3O00634 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC15.26■□□□□ 0.03
NTN3O00634 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC15.26■□□□□ 0.03
NTN3O00634 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC15.26■□□□□ 0.03
NTN3O00634 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
NTN3O00634 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC15.26■□□□□ 0.03
NTN3O00634 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
NTN3O00634 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC15.26■□□□□ 0.03
NTN3O00634 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC15.26■□□□□ 0.03
NTN3O00634 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC15.26■□□□□ 0.03
NTN3O00634 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC15.26■□□□□ 0.03
NTN3O00634 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC15.26■□□□□ 0.03
NTN3O00634 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC15.26■□□□□ 0.03
NTN3O00634 WNT11-204ENST00000621122 789 ntTSL 5 BASIC15.26■□□□□ 0.03
NTN3O00634 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
NTN3O00634 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
NTN3O00634 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC15.26■□□□□ 0.03
NTN3O00634 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NTN3O00634 CEP83-AS1-201ENST00000623122 2482 ntBASIC15.26■□□□□ 0.03
NTN3O00634 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NTN3O00634 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
NTN3O00634 ZBTB45P2-201ENST00000452245 1531 ntBASIC15.26■□□□□ 0.03
NTN3O00634 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
NTN3O00634 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NTN3O00634 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
NTN3O00634 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NTN3O00634 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
NTN3O00634 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NTN3O00634 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
NTN3O00634 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
NTN3O00634 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
NTN3O00634 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
NTN3O00634 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NTN3O00634 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC15.25■□□□□ 0.03
NTN3O00634 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC15.25■□□□□ 0.03
NTN3O00634 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NTN3O00634 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NTN3O00634 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NTN3O00634 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NTN3O00634 APOA1-205ENST00000375329 927 ntTSL 2 BASIC15.25■□□□□ 0.03
NTN3O00634 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NTN3O00634 MPV17-208ENST00000405076 603 ntTSL 5 BASIC15.25■□□□□ 0.03
NTN3O00634 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC15.25■□□□□ 0.03
NTN3O00634 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
NTN3O00634 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC15.25■□□□□ 0.03
NTN3O00634 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC15.25■□□□□ 0.03
NTN3O00634 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
NTN3O00634 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC15.25■□□□□ 0.03
NTN3O00634 AL359711.2-201ENST00000563105 872 ntBASIC15.25■□□□□ 0.03
NTN3O00634 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC15.25■□□□□ 0.03
NTN3O00634 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC15.25■□□□□ 0.03
NTN3O00634 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms