Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC17.43■□□□□ 0.38
O00370 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC17.43■□□□□ 0.38
O00370 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC17.43■□□□□ 0.38
O00370 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC17.43■□□□□ 0.38
O00370 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC17.43■□□□□ 0.38
O00370 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
O00370 AC008267.7-201ENST00000624570 1194 ntBASIC17.43■□□□□ 0.38
O00370 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC17.43■□□□□ 0.38
O00370 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC17.43■□□□□ 0.38
O00370 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC17.43■□□□□ 0.38
O00370 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC17.43■□□□□ 0.38
O00370 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC17.43■□□□□ 0.38
O00370 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
O00370 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
O00370 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
O00370 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
O00370 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC17.43■□□□□ 0.38
O00370 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
O00370 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
O00370 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
O00370 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC17.42■□□□□ 0.38
O00370 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
O00370 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
O00370 BLK-205ENST00000529894 2017 ntTSL 5 BASIC17.42■□□□□ 0.38
O00370 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
O00370 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
O00370 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC17.42■□□□□ 0.38
O00370 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
O00370 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
O00370 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
O00370 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
O00370 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
O00370 RELA-227ENST00000615805 2236 ntTSL 5 BASIC17.42■□□□□ 0.38
O00370 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC17.42■□□□□ 0.38
O00370 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC17.42■□□□□ 0.38
O00370 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC17.42■□□□□ 0.38
O00370 AC211486.1-202ENST00000416371 468 ntBASIC17.42■□□□□ 0.38
O00370 AC211476.1-201ENST00000503899 468 ntBASIC17.42■□□□□ 0.38
O00370 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC17.42■□□□□ 0.38
O00370 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC17.42■□□□□ 0.38
O00370 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC17.42■□□□□ 0.38
O00370 AC027307.2-201ENST00000591252 911 ntBASIC17.42■□□□□ 0.38
O00370 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC17.42■□□□□ 0.38
O00370 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC17.42■□□□□ 0.38
O00370 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
O00370 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC17.42■□□□□ 0.38
O00370 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
O00370 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
O00370 PAUPAR-201ENST00000630360 2965 ntBASIC17.42■□□□□ 0.38
O00370 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC17.42■□□□□ 0.38
O00370 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
O00370 LINC00554-201ENST00000564841 3011 ntBASIC17.42■□□□□ 0.38
O00370 AC105917.1-201ENST00000506637 2539 ntBASIC17.42■□□□□ 0.38
O00370 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
O00370 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
O00370 FOXO1B-201ENST00000504678 1527 ntBASIC17.42■□□□□ 0.38
O00370 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
O00370 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC17.41■□□□□ 0.38
O00370 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
O00370 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
O00370 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
O00370 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC17.41■□□□□ 0.38
O00370 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
O00370 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
O00370 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
O00370 MIR1233-2-201ENST00000408138 82 ntBASIC17.41■□□□□ 0.38
O00370 MIR1233-1-201ENST00000408722 82 ntBASIC17.41■□□□□ 0.38
O00370 AC004461.1-201ENST00000412461 403 ntBASIC17.41■□□□□ 0.38
O00370 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC17.41■□□□□ 0.38
O00370 AP006288.1-201ENST00000446065 395 ntBASIC17.41■□□□□ 0.38
O00370 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC17.41■□□□□ 0.38
O00370 AC069335.1-201ENST00000489972 472 ntBASIC17.41■□□□□ 0.38
O00370 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
O00370 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC17.41■□□□□ 0.38
O00370 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC17.41■□□□□ 0.38
O00370 AC134684.3-201ENST00000641758 218 ntBASIC17.41■□□□□ 0.38
O00370 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC17.41■□□□□ 0.38
O00370 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
O00370 REXO1L8P-201ENST00000604378 1897 ntBASIC17.41■□□□□ 0.38
O00370 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC17.41■□□□□ 0.38
O00370 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
O00370 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
O00370 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
O00370 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
O00370 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
O00370 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
O00370 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC17.4■□□□□ 0.38
O00370 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
O00370 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
O00370 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
O00370 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC17.4■□□□□ 0.38
O00370 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
O00370 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
O00370 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
O00370 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC17.4■□□□□ 0.38
O00370 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
O00370 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
O00370 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
O00370 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
O00370 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms