Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TMEM88BA6NKF7 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TMEM88BA6NKF7 RASSF6-202ENST00000335049 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
TMEM88BA6NKF7 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC18.65■□□□□ 0.58
TMEM88BA6NKF7 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
TMEM88BA6NKF7 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
TMEM88BA6NKF7 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC18.64■□□□□ 0.58
TMEM88BA6NKF7 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC18.64■□□□□ 0.58
TMEM88BA6NKF7 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC18.64■□□□□ 0.58
TMEM88BA6NKF7 TPR-209ENST00000613151 2478 ntTSL 5 BASIC18.64■□□□□ 0.58
TMEM88BA6NKF7 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TMEM88BA6NKF7 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC18.64■□□□□ 0.57
TMEM88BA6NKF7 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.57
TMEM88BA6NKF7 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.57
TMEM88BA6NKF7 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TMEM88BA6NKF7 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TMEM88BA6NKF7 CELA2B-201ENST00000375910 923 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TMEM88BA6NKF7 TEX30-203ENST00000376022 828 ntTSL 2 BASIC18.64■□□□□ 0.57
TMEM88BA6NKF7 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
TMEM88BA6NKF7 AC004987.2-201ENST00000395959 1148 ntBASIC18.64■□□□□ 0.57
TMEM88BA6NKF7 AC234644.1-201ENST00000406065 370 ntBASIC18.64■□□□□ 0.57
TMEM88BA6NKF7 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC18.64■□□□□ 0.57
TMEM88BA6NKF7 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC18.64■□□□□ 0.57
TMEM88BA6NKF7 CR589904.1-202ENST00000611154 660 ntTSL 5 BASIC18.64■□□□□ 0.57
TMEM88BA6NKF7 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
TMEM88BA6NKF7 AC006453.4-201ENST00000636949 1252 ntBASIC18.64■□□□□ 0.57
TMEM88BA6NKF7 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TMEM88BA6NKF7 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
TMEM88BA6NKF7 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TMEM88BA6NKF7 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TMEM88BA6NKF7 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
TMEM88BA6NKF7 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TMEM88BA6NKF7 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC18.64■□□□□ 0.57
TMEM88BA6NKF7 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TMEM88BA6NKF7 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
TMEM88BA6NKF7 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TMEM88BA6NKF7 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
TMEM88BA6NKF7 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TMEM88BA6NKF7 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
TMEM88BA6NKF7 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC18.63■□□□□ 0.57
TMEM88BA6NKF7 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TMEM88BA6NKF7 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
TMEM88BA6NKF7 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TMEM88BA6NKF7 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TMEM88BA6NKF7 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
TMEM88BA6NKF7 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
TMEM88BA6NKF7 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TMEM88BA6NKF7 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
TMEM88BA6NKF7 TNXA-203ENST00000507684 2038 ntBASIC18.63■□□□□ 0.57
TMEM88BA6NKF7 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
TMEM88BA6NKF7 SDCCAG3P2-201ENST00000326105 1023 ntBASIC18.63■□□□□ 0.57
TMEM88BA6NKF7 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
TMEM88BA6NKF7 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TMEM88BA6NKF7 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TMEM88BA6NKF7 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TMEM88BA6NKF7 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC18.63■□□□□ 0.57
TMEM88BA6NKF7 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TMEM88BA6NKF7 EEF1DP4-201ENST00000446006 880 ntBASIC18.63■□□□□ 0.57
TMEM88BA6NKF7 RNA5SP486-201ENST00000515961 83 ntBASIC18.63■□□□□ 0.57
TMEM88BA6NKF7 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TMEM88BA6NKF7 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC18.63■□□□□ 0.57
TMEM88BA6NKF7 TPGS2-209ENST00000589049 1102 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TMEM88BA6NKF7 AC145423.3-201ENST00000615987 467 ntBASIC18.63■□□□□ 0.57
TMEM88BA6NKF7 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC18.63■□□□□ 0.57
TMEM88BA6NKF7 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TMEM88BA6NKF7 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC18.63■□□□□ 0.57
TMEM88BA6NKF7 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TMEM88BA6NKF7 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC18.63■□□□□ 0.57
TMEM88BA6NKF7 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
TMEM88BA6NKF7 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TMEM88BA6NKF7 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
TMEM88BA6NKF7 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
TMEM88BA6NKF7 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
TMEM88BA6NKF7 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TMEM88BA6NKF7 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TMEM88BA6NKF7 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
TMEM88BA6NKF7 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
TMEM88BA6NKF7 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC18.62■□□□□ 0.57
TMEM88BA6NKF7 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TMEM88BA6NKF7 PGGT1BP2-201ENST00000398621 1028 ntBASIC18.62■□□□□ 0.57
TMEM88BA6NKF7 AL008707.1-201ENST00000422498 534 ntBASIC18.62■□□□□ 0.57
TMEM88BA6NKF7 AL137856.1-201ENST00000429398 773 ntTSL 3 BASIC18.62■□□□□ 0.57
TMEM88BA6NKF7 KRT18P64-201ENST00000434946 1219 ntBASIC18.62■□□□□ 0.57
TMEM88BA6NKF7 NKAIN1P1-201ENST00000435754 582 ntBASIC18.62■□□□□ 0.57
TMEM88BA6NKF7 USP40-206ENST00000443711 628 ntTSL 2 BASIC18.62■□□□□ 0.57
TMEM88BA6NKF7 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TMEM88BA6NKF7 HSPB1P2-201ENST00000448722 546 ntBASIC18.62■□□□□ 0.57
TMEM88BA6NKF7 RN7SL11P-201ENST00000471305 293 ntBASIC18.62■□□□□ 0.57
TMEM88BA6NKF7 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TMEM88BA6NKF7 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC18.62■□□□□ 0.57
TMEM88BA6NKF7 EIF3K-202ENST00000538434 966 ntTSL 2 BASIC18.62■□□□□ 0.57
TMEM88BA6NKF7 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TMEM88BA6NKF7 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC18.62■□□□□ 0.57
TMEM88BA6NKF7 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC18.62■□□□□ 0.57
TMEM88BA6NKF7 AL133499.1-201ENST00000596207 608 ntBASIC18.62■□□□□ 0.57
TMEM88BA6NKF7 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TMEM88BA6NKF7 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC18.62■□□□□ 0.57
TMEM88BA6NKF7 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
TMEM88BA6NKF7 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC18.62■□□□□ 0.57
TMEM88BA6NKF7 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms