Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TCRBV3S1A0A5B6 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TCRBV3S1A0A5B6 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TCRBV3S1A0A5B6 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TCRBV3S1A0A5B6 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TCRBV3S1A0A5B6 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TCRBV3S1A0A5B6 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
TCRBV3S1A0A5B6 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TCRBV3S1A0A5B6 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
TCRBV3S1A0A5B6 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
TCRBV3S1A0A5B6 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TCRBV3S1A0A5B6 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC15.3■□□□□ 0.04
TCRBV3S1A0A5B6 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
TCRBV3S1A0A5B6 POM121L3P-201ENST00000419331 1163 ntBASIC15.3■□□□□ 0.04
TCRBV3S1A0A5B6 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC15.3■□□□□ 0.04
TCRBV3S1A0A5B6 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC15.3■□□□□ 0.04
TCRBV3S1A0A5B6 BX276092.5-203ENST00000456199 560 ntBASIC15.3■□□□□ 0.04
TCRBV3S1A0A5B6 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TCRBV3S1A0A5B6 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TCRBV3S1A0A5B6 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC15.3■□□□□ 0.04
TCRBV3S1A0A5B6 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC15.3■□□□□ 0.04
TCRBV3S1A0A5B6 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC15.3■□□□□ 0.04
TCRBV3S1A0A5B6 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC15.3■□□□□ 0.04
TCRBV3S1A0A5B6 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
TCRBV3S1A0A5B6 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
TCRBV3S1A0A5B6 AL121672.3-201ENST00000608644 468 ntBASIC15.3■□□□□ 0.04
TCRBV3S1A0A5B6 C18orf15-201ENST00000623680 2534 ntBASIC15.3■□□□□ 0.04
TCRBV3S1A0A5B6 AC016734.2-201ENST00000624325 1377 ntBASIC15.3■□□□□ 0.04
TCRBV3S1A0A5B6 AC097493.4-201ENST00000641197 219 ntBASIC15.3■□□□□ 0.04
TCRBV3S1A0A5B6 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TCRBV3S1A0A5B6 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TCRBV3S1A0A5B6 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
TCRBV3S1A0A5B6 F11R-206ENST00000621309 4770 ntTSL 5 BASIC15.3■□□□□ 0.04
TCRBV3S1A0A5B6 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TCRBV3S1A0A5B6 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TCRBV3S1A0A5B6 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC15.3■□□□□ 0.04
TCRBV3S1A0A5B6 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC15.3■□□□□ 0.04
TCRBV3S1A0A5B6 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TCRBV3S1A0A5B6 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC15.29■□□□□ 0.04
TCRBV3S1A0A5B6 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC15.29■□□□□ 0.04
TCRBV3S1A0A5B6 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC15.29■□□□□ 0.04
TCRBV3S1A0A5B6 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TCRBV3S1A0A5B6 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC15.29■□□□□ 0.04
TCRBV3S1A0A5B6 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC15.29■□□□□ 0.04
TCRBV3S1A0A5B6 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TCRBV3S1A0A5B6 GPI-205ENST00000586425 1799 ntTSL 5 BASIC15.29■□□□□ 0.04
TCRBV3S1A0A5B6 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TCRBV3S1A0A5B6 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
TCRBV3S1A0A5B6 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TCRBV3S1A0A5B6 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
TCRBV3S1A0A5B6 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TCRBV3S1A0A5B6 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TCRBV3S1A0A5B6 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TCRBV3S1A0A5B6 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TCRBV3S1A0A5B6 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC15.29■□□□□ 0.04
TCRBV3S1A0A5B6 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TCRBV3S1A0A5B6 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TCRBV3S1A0A5B6 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TCRBV3S1A0A5B6 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TCRBV3S1A0A5B6 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TCRBV3S1A0A5B6 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC15.29■□□□□ 0.04
TCRBV3S1A0A5B6 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC15.29■□□□□ 0.04
TCRBV3S1A0A5B6 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC15.29■□□□□ 0.04
TCRBV3S1A0A5B6 STARD13-205ENST00000439831 945 ntTSL 2 BASIC15.29■□□□□ 0.04
TCRBV3S1A0A5B6 KRT18P57-201ENST00000443599 1254 ntBASIC15.29■□□□□ 0.04
TCRBV3S1A0A5B6 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
TCRBV3S1A0A5B6 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
TCRBV3S1A0A5B6 BX005266.1-201ENST00000473402 457 ntBASIC15.29■□□□□ 0.04
TCRBV3S1A0A5B6 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC15.29■□□□□ 0.04
TCRBV3S1A0A5B6 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC15.29■□□□□ 0.04
TCRBV3S1A0A5B6 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC15.29■□□□□ 0.04
TCRBV3S1A0A5B6 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC15.29■□□□□ 0.04
TCRBV3S1A0A5B6 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
TCRBV3S1A0A5B6 BSG-214ENST00000614867 960 ntTSL 3 BASIC15.29■□□□□ 0.04
TCRBV3S1A0A5B6 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC15.29■□□□□ 0.04
TCRBV3S1A0A5B6 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
TCRBV3S1A0A5B6 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC15.29■□□□□ 0.04
TCRBV3S1A0A5B6 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TCRBV3S1A0A5B6 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC15.29■□□□□ 0.04
TCRBV3S1A0A5B6 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
TCRBV3S1A0A5B6 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TCRBV3S1A0A5B6 AC232323.1-201ENST00000540724 2099 ntBASIC15.29■□□□□ 0.04
TCRBV3S1A0A5B6 REXO1L5P-201ENST00000622260 2098 ntBASIC15.29■□□□□ 0.04
TCRBV3S1A0A5B6 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC15.29■□□□□ 0.04
TCRBV3S1A0A5B6 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
TCRBV3S1A0A5B6 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC15.29■□□□□ 0.04
TCRBV3S1A0A5B6 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
TCRBV3S1A0A5B6 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TCRBV3S1A0A5B6 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
TCRBV3S1A0A5B6 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TCRBV3S1A0A5B6 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC15.28■□□□□ 0.04
TCRBV3S1A0A5B6 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC15.28■□□□□ 0.04
TCRBV3S1A0A5B6 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TCRBV3S1A0A5B6 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC15.28■□□□□ 0.04
TCRBV3S1A0A5B6 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TCRBV3S1A0A5B6 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TCRBV3S1A0A5B6 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TCRBV3S1A0A5B6 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC15.28■□□□□ 0.04
TCRBV3S1A0A5B6 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TCRBV3S1A0A5B6 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms