Protein–RNA interactions for Protein: Q9Y5H4

PCDHGA1, Protocadherin gamma-A1, humanhuman

Predictions only

Length 931 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1Q9Y5H4 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC15.64■□□□□ 0.09
PCDHGA1Q9Y5H4 MPV17-208ENST00000405076 603 ntTSL 5 BASIC15.64■□□□□ 0.09
PCDHGA1Q9Y5H4 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
PCDHGA1Q9Y5H4 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
PCDHGA1Q9Y5H4 KRT43P-201ENST00000434019 910 ntBASIC15.64■□□□□ 0.09
PCDHGA1Q9Y5H4 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC15.64■□□□□ 0.09
PCDHGA1Q9Y5H4 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC15.64■□□□□ 0.09
PCDHGA1Q9Y5H4 AC104596.2-201ENST00000512793 793 ntBASIC15.64■□□□□ 0.09
PCDHGA1Q9Y5H4 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC15.64■□□□□ 0.09
PCDHGA1Q9Y5H4 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC15.64■□□□□ 0.09
PCDHGA1Q9Y5H4 TIMM17BP1-201ENST00000545713 516 ntBASIC15.64■□□□□ 0.09
PCDHGA1Q9Y5H4 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC15.64■□□□□ 0.09
PCDHGA1Q9Y5H4 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC15.64■□□□□ 0.09
PCDHGA1Q9Y5H4 AL606495.2-201ENST00000605867 535 ntBASIC15.64■□□□□ 0.09
PCDHGA1Q9Y5H4 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PCDHGA1Q9Y5H4 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC15.64■□□□□ 0.09
PCDHGA1Q9Y5H4 AL033527.5-201ENST00000641382 801 ntBASIC15.64■□□□□ 0.09
PCDHGA1Q9Y5H4 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
PCDHGA1Q9Y5H4 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PCDHGA1Q9Y5H4 FST-202ENST00000396947 2538 ntTSL 5 BASIC15.64■□□□□ 0.09
PCDHGA1Q9Y5H4 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
PCDHGA1Q9Y5H4 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
PCDHGA1Q9Y5H4 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
PCDHGA1Q9Y5H4 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PCDHGA1Q9Y5H4 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
PCDHGA1Q9Y5H4 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PCDHGA1Q9Y5H4 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC15.64■□□□□ 0.09
PCDHGA1Q9Y5H4 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PCDHGA1Q9Y5H4 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
PCDHGA1Q9Y5H4 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
PCDHGA1Q9Y5H4 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
PCDHGA1Q9Y5H4 AC124067.4-201ENST00000519691 2379 ntBASIC15.63■□□□□ 0.09
PCDHGA1Q9Y5H4 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC15.63■□□□□ 0.09
PCDHGA1Q9Y5H4 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PCDHGA1Q9Y5H4 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
PCDHGA1Q9Y5H4 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PCDHGA1Q9Y5H4 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PCDHGA1Q9Y5H4 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC15.63■□□□□ 0.09
PCDHGA1Q9Y5H4 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
PCDHGA1Q9Y5H4 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PCDHGA1Q9Y5H4 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PCDHGA1Q9Y5H4 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
PCDHGA1Q9Y5H4 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PCDHGA1Q9Y5H4 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC15.63■□□□□ 0.09
PCDHGA1Q9Y5H4 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC15.63■□□□□ 0.09
PCDHGA1Q9Y5H4 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC15.63■□□□□ 0.09
PCDHGA1Q9Y5H4 AP002490.2-201ENST00000524791 560 ntBASIC15.63■□□□□ 0.09
PCDHGA1Q9Y5H4 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC15.63■□□□□ 0.09
PCDHGA1Q9Y5H4 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PCDHGA1Q9Y5H4 RARRES2P5-201ENST00000564013 466 ntBASIC15.63■□□□□ 0.09
PCDHGA1Q9Y5H4 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC15.63■□□□□ 0.09
PCDHGA1Q9Y5H4 MIR4525-201ENST00000580000 75 ntBASIC15.63■□□□□ 0.09
PCDHGA1Q9Y5H4 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC15.63■□□□□ 0.09
PCDHGA1Q9Y5H4 MIR8072-201ENST00000614241 80 ntBASIC15.63■□□□□ 0.09
PCDHGA1Q9Y5H4 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC15.63■□□□□ 0.09
PCDHGA1Q9Y5H4 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
PCDHGA1Q9Y5H4 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PCDHGA1Q9Y5H4 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC15.63■□□□□ 0.09
PCDHGA1Q9Y5H4 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
PCDHGA1Q9Y5H4 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
PCDHGA1Q9Y5H4 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
PCDHGA1Q9Y5H4 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
PCDHGA1Q9Y5H4 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC15.63■□□□□ 0.09
PCDHGA1Q9Y5H4 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC15.63■□□□□ 0.09
PCDHGA1Q9Y5H4 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PCDHGA1Q9Y5H4 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC15.63■□□□□ 0.09
PCDHGA1Q9Y5H4 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC15.62■□□□□ 0.09
PCDHGA1Q9Y5H4 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC15.62■□□□□ 0.09
PCDHGA1Q9Y5H4 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
PCDHGA1Q9Y5H4 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
PCDHGA1Q9Y5H4 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
PCDHGA1Q9Y5H4 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PCDHGA1Q9Y5H4 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC15.62■□□□□ 0.09
PCDHGA1Q9Y5H4 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
PCDHGA1Q9Y5H4 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC15.62■□□□□ 0.09
PCDHGA1Q9Y5H4 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
PCDHGA1Q9Y5H4 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
PCDHGA1Q9Y5H4 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
PCDHGA1Q9Y5H4 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PCDHGA1Q9Y5H4 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
PCDHGA1Q9Y5H4 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
PCDHGA1Q9Y5H4 FO393414.2-201ENST00000405153 598 ntBASIC15.62■□□□□ 0.09
PCDHGA1Q9Y5H4 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
PCDHGA1Q9Y5H4 AC098850.1-201ENST00000419919 790 ntBASIC15.62■□□□□ 0.09
PCDHGA1Q9Y5H4 TMEM14DP-201ENST00000422205 345 ntBASIC15.62■□□□□ 0.09
PCDHGA1Q9Y5H4 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
PCDHGA1Q9Y5H4 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
PCDHGA1Q9Y5H4 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC15.62■□□□□ 0.09
PCDHGA1Q9Y5H4 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC15.62■□□□□ 0.09
PCDHGA1Q9Y5H4 AL589987.1-201ENST00000453380 819 ntBASIC15.62■□□□□ 0.09
PCDHGA1Q9Y5H4 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC15.62■□□□□ 0.09
PCDHGA1Q9Y5H4 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC15.62■□□□□ 0.09
PCDHGA1Q9Y5H4 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
PCDHGA1Q9Y5H4 AC104989.1-201ENST00000519711 778 ntBASIC15.62■□□□□ 0.09
PCDHGA1Q9Y5H4 PACS1-203ENST00000524815 628 ntTSL 4 BASIC15.62■□□□□ 0.09
PCDHGA1Q9Y5H4 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC15.62■□□□□ 0.09
PCDHGA1Q9Y5H4 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC15.62■□□□□ 0.09
PCDHGA1Q9Y5H4 FAM8A2P-201ENST00000528813 1142 ntBASIC15.62■□□□□ 0.09
PCDHGA1Q9Y5H4 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC15.62■□□□□ 0.09
PCDHGA1Q9Y5H4 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms