Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CNTN3Q9P232 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CNTN3Q9P232 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC17.5■□□□□ 0.39
CNTN3Q9P232 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CNTN3Q9P232 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CNTN3Q9P232 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CNTN3Q9P232 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CNTN3Q9P232 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CNTN3Q9P232 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
CNTN3Q9P232 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CNTN3Q9P232 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CNTN3Q9P232 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC17.5■□□□□ 0.39
CNTN3Q9P232 HNRNPA1P40-201ENST00000426371 1278 ntBASIC17.5■□□□□ 0.39
CNTN3Q9P232 AC009477.1-201ENST00000452936 217 ntBASIC17.5■□□□□ 0.39
CNTN3Q9P232 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC17.5■□□□□ 0.39
CNTN3Q9P232 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC17.5■□□□□ 0.39
CNTN3Q9P232 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC17.5■□□□□ 0.39
CNTN3Q9P232 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC17.5■□□□□ 0.39
CNTN3Q9P232 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC17.5■□□□□ 0.39
CNTN3Q9P232 PRR29-209ENST00000582540 967 ntTSL 2 BASIC17.5■□□□□ 0.39
CNTN3Q9P232 LINC02084-201ENST00000606069 1096 ntBASIC17.5■□□□□ 0.39
CNTN3Q9P232 AL844908.2-201ENST00000609461 460 ntBASIC17.5■□□□□ 0.39
CNTN3Q9P232 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
CNTN3Q9P232 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC17.5■□□□□ 0.39
CNTN3Q9P232 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CNTN3Q9P232 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CNTN3Q9P232 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CNTN3Q9P232 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
CNTN3Q9P232 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CNTN3Q9P232 PCDH8P1-201ENST00000428983 2773 ntBASIC17.5■□□□□ 0.39
CNTN3Q9P232 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
CNTN3Q9P232 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CNTN3Q9P232 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC17.49■□□□□ 0.39
CNTN3Q9P232 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
CNTN3Q9P232 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CNTN3Q9P232 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
CNTN3Q9P232 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
CNTN3Q9P232 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CNTN3Q9P232 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
CNTN3Q9P232 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CNTN3Q9P232 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
CNTN3Q9P232 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC17.49■□□□□ 0.39
CNTN3Q9P232 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CNTN3Q9P232 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC17.49■□□□□ 0.39
CNTN3Q9P232 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC17.49■□□□□ 0.39
CNTN3Q9P232 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CNTN3Q9P232 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CNTN3Q9P232 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
CNTN3Q9P232 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CNTN3Q9P232 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
CNTN3Q9P232 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CNTN3Q9P232 KLK8-202ENST00000320838 456 ntTSL 5 BASIC17.49■□□□□ 0.39
CNTN3Q9P232 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CNTN3Q9P232 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CNTN3Q9P232 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CNTN3Q9P232 MIR661-201ENST00000384842 89 ntBASIC17.49■□□□□ 0.39
CNTN3Q9P232 RAC2-204ENST00000406508 893 ntTSL 5 BASIC17.49■□□□□ 0.39
CNTN3Q9P232 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC17.49■□□□□ 0.39
CNTN3Q9P232 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CNTN3Q9P232 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC17.49■□□□□ 0.39
CNTN3Q9P232 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC17.49■□□□□ 0.39
CNTN3Q9P232 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CNTN3Q9P232 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC17.49■□□□□ 0.39
CNTN3Q9P232 GREM1-201ENST00000560677 623 ntTSL 4 BASIC17.49■□□□□ 0.39
CNTN3Q9P232 HFE2-206ENST00000634927 506 ntTSL 4 BASIC17.49■□□□□ 0.39
CNTN3Q9P232 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC17.49■□□□□ 0.39
CNTN3Q9P232 KRT8P12-202ENST00000472924 1397 ntBASIC17.49■□□□□ 0.39
CNTN3Q9P232 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
CNTN3Q9P232 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CNTN3Q9P232 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CNTN3Q9P232 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CNTN3Q9P232 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CNTN3Q9P232 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CNTN3Q9P232 AC022144.1-201ENST00000602255 1580 ntBASIC17.49■□□□□ 0.39
CNTN3Q9P232 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC17.49■□□□□ 0.39
CNTN3Q9P232 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
CNTN3Q9P232 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC17.48■□□□□ 0.39
CNTN3Q9P232 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC17.48■□□□□ 0.39
CNTN3Q9P232 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
CNTN3Q9P232 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CNTN3Q9P232 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC17.48■□□□□ 0.39
CNTN3Q9P232 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC17.48■□□□□ 0.39
CNTN3Q9P232 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CNTN3Q9P232 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CNTN3Q9P232 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC17.48■□□□□ 0.39
CNTN3Q9P232 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CNTN3Q9P232 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CNTN3Q9P232 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
CNTN3Q9P232 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC17.48■□□□□ 0.39
CNTN3Q9P232 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CNTN3Q9P232 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC17.48■□□□□ 0.39
CNTN3Q9P232 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CNTN3Q9P232 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CNTN3Q9P232 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CNTN3Q9P232 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
CNTN3Q9P232 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CNTN3Q9P232 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC17.48■□□□□ 0.39
CNTN3Q9P232 CENPM-206ENST00000407253 818 ntTSL 2 BASIC17.48■□□□□ 0.39
CNTN3Q9P232 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CNTN3Q9P232 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms