Protein–RNA interactions for Protein: Q9NXB0

MKS1, Meckel syndrome type 1 protein, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1Q9NXB0 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
MKS1Q9NXB0 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC16.13■□□□□ 0.17
MKS1Q9NXB0 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
MKS1Q9NXB0 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC16.13■□□□□ 0.17
MKS1Q9NXB0 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
MKS1Q9NXB0 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
MKS1Q9NXB0 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC16.13■□□□□ 0.17
MKS1Q9NXB0 AC138035.3-201ENST00000622706 2791 ntBASIC16.13■□□□□ 0.17
MKS1Q9NXB0 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
MKS1Q9NXB0 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
MKS1Q9NXB0 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
MKS1Q9NXB0 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
MKS1Q9NXB0 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
MKS1Q9NXB0 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
MKS1Q9NXB0 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
MKS1Q9NXB0 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC16.12■□□□□ 0.17
MKS1Q9NXB0 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC16.12■□□□□ 0.17
MKS1Q9NXB0 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC16.12■□□□□ 0.17
MKS1Q9NXB0 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC16.12■□□□□ 0.17
MKS1Q9NXB0 AC105250.1-201ENST00000509378 2057 ntBASIC16.12■□□□□ 0.17
MKS1Q9NXB0 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC16.12■□□□□ 0.17
MKS1Q9NXB0 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC16.12■□□□□ 0.17
MKS1Q9NXB0 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC16.12■□□□□ 0.17
MKS1Q9NXB0 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
MKS1Q9NXB0 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
MKS1Q9NXB0 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
MKS1Q9NXB0 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
MKS1Q9NXB0 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
MKS1Q9NXB0 AP001282.1-201ENST00000531301 1499 ntBASIC16.12■□□□□ 0.17
MKS1Q9NXB0 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
MKS1Q9NXB0 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
MKS1Q9NXB0 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
MKS1Q9NXB0 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
MKS1Q9NXB0 SLC9A7P1-201ENST00000554295 3311 ntBASIC16.12■□□□□ 0.17
MKS1Q9NXB0 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC16.12■□□□□ 0.17
MKS1Q9NXB0 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
MKS1Q9NXB0 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
MKS1Q9NXB0 AKR1C7P-201ENST00000305623 895 ntBASIC16.12■□□□□ 0.17
MKS1Q9NXB0 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC16.12■□□□□ 0.17
MKS1Q9NXB0 MRPL20P1-201ENST00000400819 433 ntBASIC16.12■□□□□ 0.17
MKS1Q9NXB0 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC16.12■□□□□ 0.17
MKS1Q9NXB0 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC16.12■□□□□ 0.17
MKS1Q9NXB0 TSPY19P-201ENST00000418461 509 ntBASIC16.12■□□□□ 0.17
MKS1Q9NXB0 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC16.12■□□□□ 0.17
MKS1Q9NXB0 TSPY18P-201ENST00000441642 509 ntBASIC16.12■□□□□ 0.17
MKS1Q9NXB0 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
MKS1Q9NXB0 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC16.12■□□□□ 0.17
MKS1Q9NXB0 AP002469.2-201ENST00000531724 424 ntBASIC16.12■□□□□ 0.17
MKS1Q9NXB0 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC16.12■□□□□ 0.17
MKS1Q9NXB0 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC16.12■□□□□ 0.17
MKS1Q9NXB0 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC16.12■□□□□ 0.17
MKS1Q9NXB0 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
MKS1Q9NXB0 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
MKS1Q9NXB0 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
MKS1Q9NXB0 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
MKS1Q9NXB0 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC16.12■□□□□ 0.17
MKS1Q9NXB0 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC16.12■□□□□ 0.17
MKS1Q9NXB0 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC16.12■□□□□ 0.17
MKS1Q9NXB0 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
MKS1Q9NXB0 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
MKS1Q9NXB0 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC16.12■□□□□ 0.17
MKS1Q9NXB0 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
MKS1Q9NXB0 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
MKS1Q9NXB0 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC16.11■□□□□ 0.17
MKS1Q9NXB0 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
MKS1Q9NXB0 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC16.11■□□□□ 0.17
MKS1Q9NXB0 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC16.11■□□□□ 0.17
MKS1Q9NXB0 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
MKS1Q9NXB0 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC16.11■□□□□ 0.17
MKS1Q9NXB0 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
MKS1Q9NXB0 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
MKS1Q9NXB0 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
MKS1Q9NXB0 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
MKS1Q9NXB0 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC16.11■□□□□ 0.17
MKS1Q9NXB0 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
MKS1Q9NXB0 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
MKS1Q9NXB0 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
MKS1Q9NXB0 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC16.11■□□□□ 0.17
MKS1Q9NXB0 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
MKS1Q9NXB0 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
MKS1Q9NXB0 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
MKS1Q9NXB0 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC16.11■□□□□ 0.17
MKS1Q9NXB0 HIST2H3DP1-201ENST00000401004 416 ntBASIC16.11■□□□□ 0.17
MKS1Q9NXB0 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC16.11■□□□□ 0.17
MKS1Q9NXB0 SAPCD2P3-201ENST00000455031 850 ntBASIC16.11■□□□□ 0.17
MKS1Q9NXB0 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
MKS1Q9NXB0 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
MKS1Q9NXB0 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC16.11■□□□□ 0.17
MKS1Q9NXB0 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC16.11■□□□□ 0.17
MKS1Q9NXB0 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC16.11■□□□□ 0.17
MKS1Q9NXB0 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC16.11■□□□□ 0.17
MKS1Q9NXB0 HADH-212ENST00000638621 741 ntTSL 5 BASIC16.11■□□□□ 0.17
MKS1Q9NXB0 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
MKS1Q9NXB0 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
MKS1Q9NXB0 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
MKS1Q9NXB0 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC16.11■□□□□ 0.17
MKS1Q9NXB0 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
MKS1Q9NXB0 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC16.11■□□□□ 0.17
MKS1Q9NXB0 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
MKS1Q9NXB0 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms