Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
NEUROD4Q9HD90 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
NEUROD4Q9HD90 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
NEUROD4Q9HD90 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
NEUROD4Q9HD90 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
NEUROD4Q9HD90 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
NEUROD4Q9HD90 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC15.47■□□□□ 0.07
NEUROD4Q9HD90 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
NEUROD4Q9HD90 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
NEUROD4Q9HD90 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC15.47■□□□□ 0.07
NEUROD4Q9HD90 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC15.46■□□□□ 0.07
NEUROD4Q9HD90 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
NEUROD4Q9HD90 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
NEUROD4Q9HD90 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
NEUROD4Q9HD90 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
NEUROD4Q9HD90 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC15.46■□□□□ 0.07
NEUROD4Q9HD90 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC15.46■□□□□ 0.07
NEUROD4Q9HD90 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
NEUROD4Q9HD90 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
NEUROD4Q9HD90 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
NEUROD4Q9HD90 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC15.46■□□□□ 0.07
NEUROD4Q9HD90 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
NEUROD4Q9HD90 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
NEUROD4Q9HD90 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC15.46■□□□□ 0.07
NEUROD4Q9HD90 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
NEUROD4Q9HD90 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
NEUROD4Q9HD90 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC15.46■□□□□ 0.07
NEUROD4Q9HD90 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
NEUROD4Q9HD90 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC15.46■□□□□ 0.07
NEUROD4Q9HD90 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC15.46■□□□□ 0.07
NEUROD4Q9HD90 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC15.46■□□□□ 0.07
NEUROD4Q9HD90 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC15.46■□□□□ 0.07
NEUROD4Q9HD90 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
NEUROD4Q9HD90 AL009183.1-201ENST00000603760 355 ntBASIC15.46■□□□□ 0.07
NEUROD4Q9HD90 AC027601.4-201ENST00000611259 610 ntBASIC15.46■□□□□ 0.07
NEUROD4Q9HD90 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
NEUROD4Q9HD90 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
NEUROD4Q9HD90 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC15.46■□□□□ 0.07
NEUROD4Q9HD90 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
NEUROD4Q9HD90 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
NEUROD4Q9HD90 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
NEUROD4Q9HD90 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
NEUROD4Q9HD90 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
NEUROD4Q9HD90 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
NEUROD4Q9HD90 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
NEUROD4Q9HD90 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
NEUROD4Q9HD90 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
NEUROD4Q9HD90 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
NEUROD4Q9HD90 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
NEUROD4Q9HD90 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
NEUROD4Q9HD90 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC15.46■□□□□ 0.06
NEUROD4Q9HD90 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
NEUROD4Q9HD90 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.06
NEUROD4Q9HD90 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC15.46■□□□□ 0.06
NEUROD4Q9HD90 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
NEUROD4Q9HD90 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
NEUROD4Q9HD90 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
NEUROD4Q9HD90 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC15.45■□□□□ 0.06
NEUROD4Q9HD90 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC15.45■□□□□ 0.06
NEUROD4Q9HD90 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
NEUROD4Q9HD90 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
NEUROD4Q9HD90 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
NEUROD4Q9HD90 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
NEUROD4Q9HD90 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC15.45■□□□□ 0.06
NEUROD4Q9HD90 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC15.45■□□□□ 0.06
NEUROD4Q9HD90 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
NEUROD4Q9HD90 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
NEUROD4Q9HD90 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
NEUROD4Q9HD90 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
NEUROD4Q9HD90 FALEC-201ENST00000416894 566 ntTSL 3 BASIC15.45■□□□□ 0.06
NEUROD4Q9HD90 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC15.45■□□□□ 0.06
NEUROD4Q9HD90 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC15.45■□□□□ 0.06
NEUROD4Q9HD90 CFL1-202ENST00000524553 860 ntTSL 2 BASIC15.45■□□□□ 0.06
NEUROD4Q9HD90 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC15.45■□□□□ 0.06
NEUROD4Q9HD90 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
NEUROD4Q9HD90 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC15.45■□□□□ 0.06
NEUROD4Q9HD90 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
NEUROD4Q9HD90 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC15.45■□□□□ 0.06
NEUROD4Q9HD90 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC15.45■□□□□ 0.06
NEUROD4Q9HD90 AC079781.4-201ENST00000641908 219 ntBASIC15.45■□□□□ 0.06
NEUROD4Q9HD90 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
NEUROD4Q9HD90 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
NEUROD4Q9HD90 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC15.45■□□□□ 0.06
NEUROD4Q9HD90 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
NEUROD4Q9HD90 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
NEUROD4Q9HD90 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
NEUROD4Q9HD90 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC15.45■□□□□ 0.06
NEUROD4Q9HD90 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC15.45■□□□□ 0.06
NEUROD4Q9HD90 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
NEUROD4Q9HD90 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
NEUROD4Q9HD90 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
NEUROD4Q9HD90 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
NEUROD4Q9HD90 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
NEUROD4Q9HD90 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
NEUROD4Q9HD90 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
NEUROD4Q9HD90 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
NEUROD4Q9HD90 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
NEUROD4Q9HD90 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
NEUROD4Q9HD90 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
NEUROD4Q9HD90 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC15.44■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 63.3 ms