Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CD248Q9HCU0 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC17.26■□□□□ 0.35
CD248Q9HCU0 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC17.26■□□□□ 0.35
CD248Q9HCU0 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CD248Q9HCU0 AC099522.2-201ENST00000607001 744 ntBASIC17.26■□□□□ 0.35
CD248Q9HCU0 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC17.26■□□□□ 0.35
CD248Q9HCU0 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CD248Q9HCU0 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CD248Q9HCU0 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CD248Q9HCU0 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CD248Q9HCU0 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC17.26■□□□□ 0.35
CD248Q9HCU0 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
CD248Q9HCU0 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CD248Q9HCU0 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
CD248Q9HCU0 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CD248Q9HCU0 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
CD248Q9HCU0 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CD248Q9HCU0 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
CD248Q9HCU0 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC17.25■□□□□ 0.35
CD248Q9HCU0 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC17.25■□□□□ 0.35
CD248Q9HCU0 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
CD248Q9HCU0 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CD248Q9HCU0 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
CD248Q9HCU0 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CD248Q9HCU0 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC17.25■□□□□ 0.35
CD248Q9HCU0 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC17.25■□□□□ 0.35
CD248Q9HCU0 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CD248Q9HCU0 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CD248Q9HCU0 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
CD248Q9HCU0 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CD248Q9HCU0 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC17.25■□□□□ 0.35
CD248Q9HCU0 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC17.25■□□□□ 0.35
CD248Q9HCU0 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CD248Q9HCU0 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CD248Q9HCU0 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC17.25■□□□□ 0.35
CD248Q9HCU0 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC17.25■□□□□ 0.35
CD248Q9HCU0 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CD248Q9HCU0 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC17.25■□□□□ 0.35
CD248Q9HCU0 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC17.25■□□□□ 0.35
CD248Q9HCU0 AC093520.2-201ENST00000561830 333 ntBASIC17.25■□□□□ 0.35
CD248Q9HCU0 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CD248Q9HCU0 AC106028.4-201ENST00000614509 607 ntBASIC17.25■□□□□ 0.35
CD248Q9HCU0 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
CD248Q9HCU0 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC17.25■□□□□ 0.35
CD248Q9HCU0 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC17.25■□□□□ 0.35
CD248Q9HCU0 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CD248Q9HCU0 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC17.25■□□□□ 0.35
CD248Q9HCU0 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC17.25■□□□□ 0.35
CD248Q9HCU0 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
CD248Q9HCU0 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CD248Q9HCU0 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC17.25■□□□□ 0.35
CD248Q9HCU0 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CD248Q9HCU0 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CD248Q9HCU0 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CD248Q9HCU0 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CD248Q9HCU0 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC17.24■□□□□ 0.35
CD248Q9HCU0 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CD248Q9HCU0 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CD248Q9HCU0 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CD248Q9HCU0 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC17.24■□□□□ 0.35
CD248Q9HCU0 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CD248Q9HCU0 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CD248Q9HCU0 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CD248Q9HCU0 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CD248Q9HCU0 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
CD248Q9HCU0 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
CD248Q9HCU0 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC17.24■□□□□ 0.35
CD248Q9HCU0 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC17.24■□□□□ 0.35
CD248Q9HCU0 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC17.24■□□□□ 0.35
CD248Q9HCU0 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
CD248Q9HCU0 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
CD248Q9HCU0 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC17.24■□□□□ 0.35
CD248Q9HCU0 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
CD248Q9HCU0 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CD248Q9HCU0 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC17.24■□□□□ 0.35
CD248Q9HCU0 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC17.24■□□□□ 0.35
CD248Q9HCU0 MMP17-203ENST00000535004 719 ntTSL 3 BASIC17.24■□□□□ 0.35
CD248Q9HCU0 MIR3197-201ENST00000582241 73 ntBASIC17.24■□□□□ 0.35
CD248Q9HCU0 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC17.24■□□□□ 0.35
CD248Q9HCU0 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CD248Q9HCU0 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CD248Q9HCU0 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CD248Q9HCU0 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CD248Q9HCU0 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
CD248Q9HCU0 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC17.24■□□□□ 0.35
CD248Q9HCU0 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CD248Q9HCU0 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CD248Q9HCU0 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
CD248Q9HCU0 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC17.24■□□□□ 0.35
CD248Q9HCU0 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CD248Q9HCU0 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
CD248Q9HCU0 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CD248Q9HCU0 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC17.24■□□□□ 0.35
CD248Q9HCU0 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CD248Q9HCU0 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
CD248Q9HCU0 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC17.23■□□□□ 0.35
CD248Q9HCU0 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CD248Q9HCU0 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CD248Q9HCU0 HNRNPRP1-201ENST00000453465 1695 ntBASIC17.23■□□□□ 0.35
CD248Q9HCU0 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms