Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
SND1-IT1Q9HBX3 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.65
SND1-IT1Q9HBX3 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
SND1-IT1Q9HBX3 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
SND1-IT1Q9HBX3 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
SND1-IT1Q9HBX3 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
SND1-IT1Q9HBX3 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
SND1-IT1Q9HBX3 AC023157.3-201ENST00000619086 2088 ntBASIC11.02□□□□□ -0.65
SND1-IT1Q9HBX3 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
SND1-IT1Q9HBX3 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
SND1-IT1Q9HBX3 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
SND1-IT1Q9HBX3 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
SND1-IT1Q9HBX3 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
SND1-IT1Q9HBX3 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC11.01□□□□□ -0.65
SND1-IT1Q9HBX3 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC11.01□□□□□ -0.65
SND1-IT1Q9HBX3 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC11.01□□□□□ -0.65
SND1-IT1Q9HBX3 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
SND1-IT1Q9HBX3 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
SND1-IT1Q9HBX3 KRT8P49-201ENST00000604166 1432 ntBASIC11.01□□□□□ -0.65
SND1-IT1Q9HBX3 ACE-203ENST00000413513 2237 ntTSL 2 BASIC11.01□□□□□ -0.65
SND1-IT1Q9HBX3 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC11.01□□□□□ -0.65
SND1-IT1Q9HBX3 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
SND1-IT1Q9HBX3 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
SND1-IT1Q9HBX3 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
SND1-IT1Q9HBX3 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
SND1-IT1Q9HBX3 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC11.01□□□□□ -0.65
SND1-IT1Q9HBX3 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
SND1-IT1Q9HBX3 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
SND1-IT1Q9HBX3 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
SND1-IT1Q9HBX3 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC11.01□□□□□ -0.65
SND1-IT1Q9HBX3 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC11.01□□□□□ -0.65
SND1-IT1Q9HBX3 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC11.01□□□□□ -0.65
SND1-IT1Q9HBX3 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
SND1-IT1Q9HBX3 NUS1P1-201ENST00000446295 882 ntBASIC11.01□□□□□ -0.65
SND1-IT1Q9HBX3 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC11.01□□□□□ -0.65
SND1-IT1Q9HBX3 DET1-205ENST00000558413 583 ntTSL 4 BASIC11.01□□□□□ -0.65
SND1-IT1Q9HBX3 TK2-213ENST00000563369 882 ntTSL 5 BASIC11.01□□□□□ -0.65
SND1-IT1Q9HBX3 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
SND1-IT1Q9HBX3 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
SND1-IT1Q9HBX3 AL009178.2-201ENST00000597278 2719 ntBASIC11.01□□□□□ -0.65
SND1-IT1Q9HBX3 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
SND1-IT1Q9HBX3 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
SND1-IT1Q9HBX3 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
SND1-IT1Q9HBX3 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC11.01□□□□□ -0.65
SND1-IT1Q9HBX3 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
SND1-IT1Q9HBX3 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
SND1-IT1Q9HBX3 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC11.01□□□□□ -0.65
SND1-IT1Q9HBX3 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
SND1-IT1Q9HBX3 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
SND1-IT1Q9HBX3 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
SND1-IT1Q9HBX3 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
SND1-IT1Q9HBX3 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
SND1-IT1Q9HBX3 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
SND1-IT1Q9HBX3 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
SND1-IT1Q9HBX3 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC11.01□□□□□ -0.65
SND1-IT1Q9HBX3 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC11.01□□□□□ -0.65
SND1-IT1Q9HBX3 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC11.01□□□□□ -0.65
SND1-IT1Q9HBX3 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC11.01□□□□□ -0.65
SND1-IT1Q9HBX3 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
SND1-IT1Q9HBX3 AC073508.3-201ENST00000619697 1419 ntBASIC11.01□□□□□ -0.65
SND1-IT1Q9HBX3 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC11□□□□□ -0.65
SND1-IT1Q9HBX3 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC11□□□□□ -0.65
SND1-IT1Q9HBX3 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
SND1-IT1Q9HBX3 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC11□□□□□ -0.65
SND1-IT1Q9HBX3 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC11□□□□□ -0.65
SND1-IT1Q9HBX3 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
SND1-IT1Q9HBX3 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC11□□□□□ -0.65
SND1-IT1Q9HBX3 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
SND1-IT1Q9HBX3 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
SND1-IT1Q9HBX3 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC11□□□□□ -0.65
SND1-IT1Q9HBX3 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC11□□□□□ -0.65
SND1-IT1Q9HBX3 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC11□□□□□ -0.65
SND1-IT1Q9HBX3 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
SND1-IT1Q9HBX3 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC11□□□□□ -0.65
SND1-IT1Q9HBX3 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
SND1-IT1Q9HBX3 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
SND1-IT1Q9HBX3 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
SND1-IT1Q9HBX3 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC11□□□□□ -0.65
SND1-IT1Q9HBX3 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC11□□□□□ -0.65
SND1-IT1Q9HBX3 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC11□□□□□ -0.65
SND1-IT1Q9HBX3 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC11□□□□□ -0.65
SND1-IT1Q9HBX3 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC11□□□□□ -0.65
SND1-IT1Q9HBX3 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC11□□□□□ -0.65
SND1-IT1Q9HBX3 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC11□□□□□ -0.65
SND1-IT1Q9HBX3 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC11□□□□□ -0.65
SND1-IT1Q9HBX3 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC11□□□□□ -0.65
SND1-IT1Q9HBX3 AC011498.5-201ENST00000592027 486 ntBASIC11□□□□□ -0.65
SND1-IT1Q9HBX3 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC11□□□□□ -0.65
SND1-IT1Q9HBX3 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC11□□□□□ -0.65
SND1-IT1Q9HBX3 AC133561.5-201ENST00000635547 218 ntBASIC11□□□□□ -0.65
SND1-IT1Q9HBX3 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC11□□□□□ -0.65
SND1-IT1Q9HBX3 HNRNPRP1-201ENST00000453465 1695 ntBASIC11□□□□□ -0.65
SND1-IT1Q9HBX3 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC11□□□□□ -0.65
SND1-IT1Q9HBX3 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC11□□□□□ -0.65
SND1-IT1Q9HBX3 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
SND1-IT1Q9HBX3 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC11□□□□□ -0.65
SND1-IT1Q9HBX3 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC11□□□□□ -0.65
SND1-IT1Q9HBX3 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC11□□□□□ -0.65
SND1-IT1Q9HBX3 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
SND1-IT1Q9HBX3 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC11□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms