Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
CDH20Q9HBT6 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC14.34□□□□□ -0.11
CDH20Q9HBT6 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC14.34□□□□□ -0.11
CDH20Q9HBT6 QPRT-203ENST00000562473 579 ntTSL 3 BASIC14.34□□□□□ -0.11
CDH20Q9HBT6 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC14.34□□□□□ -0.11
CDH20Q9HBT6 AL135744.1-201ENST00000565098 629 ntBASIC14.34□□□□□ -0.11
CDH20Q9HBT6 MIR4469-201ENST00000583919 79 ntBASIC14.34□□□□□ -0.11
CDH20Q9HBT6 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
CDH20Q9HBT6 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDH20Q9HBT6 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
CDH20Q9HBT6 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDH20Q9HBT6 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
CDH20Q9HBT6 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
CDH20Q9HBT6 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDH20Q9HBT6 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDH20Q9HBT6 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
CDH20Q9HBT6 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDH20Q9HBT6 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CDH20Q9HBT6 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDH20Q9HBT6 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDH20Q9HBT6 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDH20Q9HBT6 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
CDH20Q9HBT6 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
CDH20Q9HBT6 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
CDH20Q9HBT6 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.11
CDH20Q9HBT6 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CDH20Q9HBT6 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC14.33□□□□□ -0.11
CDH20Q9HBT6 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CDH20Q9HBT6 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CDH20Q9HBT6 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
CDH20Q9HBT6 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
CDH20Q9HBT6 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CDH20Q9HBT6 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CDH20Q9HBT6 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
CDH20Q9HBT6 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CDH20Q9HBT6 LINC01144-201ENST00000626198 1710 ntBASIC14.33□□□□□ -0.12
CDH20Q9HBT6 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC14.33□□□□□ -0.12
CDH20Q9HBT6 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CDH20Q9HBT6 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC14.33□□□□□ -0.12
CDH20Q9HBT6 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CDH20Q9HBT6 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CDH20Q9HBT6 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CDH20Q9HBT6 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CDH20Q9HBT6 AC211486.1-202ENST00000416371 468 ntBASIC14.33□□□□□ -0.12
CDH20Q9HBT6 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC14.33□□□□□ -0.12
CDH20Q9HBT6 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC14.33□□□□□ -0.12
CDH20Q9HBT6 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC14.33□□□□□ -0.12
CDH20Q9HBT6 AC211476.1-201ENST00000503899 468 ntBASIC14.33□□□□□ -0.12
CDH20Q9HBT6 GATB-205ENST00000508611 605 ntTSL 2 BASIC14.33□□□□□ -0.12
CDH20Q9HBT6 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC14.33□□□□□ -0.12
CDH20Q9HBT6 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CDH20Q9HBT6 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CDH20Q9HBT6 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
CDH20Q9HBT6 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC14.33□□□□□ -0.12
CDH20Q9HBT6 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CDH20Q9HBT6 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC14.33□□□□□ -0.12
CDH20Q9HBT6 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
CDH20Q9HBT6 AC026120.1-201ENST00000611536 926 ntBASIC14.33□□□□□ -0.12
CDH20Q9HBT6 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC14.33□□□□□ -0.12
CDH20Q9HBT6 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CDH20Q9HBT6 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
CDH20Q9HBT6 BSG-215ENST00000618006 1329 ntTSL 2 BASIC14.33□□□□□ -0.12
CDH20Q9HBT6 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CDH20Q9HBT6 AC092171.3-201ENST00000610122 2651 ntBASIC14.33□□□□□ -0.12
CDH20Q9HBT6 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CDH20Q9HBT6 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
CDH20Q9HBT6 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CDH20Q9HBT6 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC14.32□□□□□ -0.12
CDH20Q9HBT6 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
CDH20Q9HBT6 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CDH20Q9HBT6 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC14.32□□□□□ -0.12
CDH20Q9HBT6 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CDH20Q9HBT6 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC14.32□□□□□ -0.12
CDH20Q9HBT6 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
CDH20Q9HBT6 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CDH20Q9HBT6 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
CDH20Q9HBT6 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CDH20Q9HBT6 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
CDH20Q9HBT6 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CDH20Q9HBT6 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CDH20Q9HBT6 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CDH20Q9HBT6 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
CDH20Q9HBT6 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC14.32□□□□□ -0.12
CDH20Q9HBT6 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CDH20Q9HBT6 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CDH20Q9HBT6 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CDH20Q9HBT6 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
CDH20Q9HBT6 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC14.32□□□□□ -0.12
CDH20Q9HBT6 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC14.32□□□□□ -0.12
CDH20Q9HBT6 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC14.32□□□□□ -0.12
CDH20Q9HBT6 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC14.32□□□□□ -0.12
CDH20Q9HBT6 IGHV3-62-201ENST00000520057 340 ntBASIC14.32□□□□□ -0.12
CDH20Q9HBT6 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC14.32□□□□□ -0.12
CDH20Q9HBT6 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC14.32□□□□□ -0.12
CDH20Q9HBT6 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CDH20Q9HBT6 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CDH20Q9HBT6 PCDHA14-201ENST00000506751 2298 ntBASIC14.32□□□□□ -0.12
CDH20Q9HBT6 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CDH20Q9HBT6 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
CDH20Q9HBT6 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms