Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC13.78□□□□□ -0.2
PCGF1Q9BSM1 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC13.78□□□□□ -0.2
PCGF1Q9BSM1 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PCGF1Q9BSM1 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
PCGF1Q9BSM1 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC13.78□□□□□ -0.2
PCGF1Q9BSM1 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
PCGF1Q9BSM1 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC13.78□□□□□ -0.2
PCGF1Q9BSM1 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC13.78□□□□□ -0.2
PCGF1Q9BSM1 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC13.78□□□□□ -0.2
PCGF1Q9BSM1 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
PCGF1Q9BSM1 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC13.78□□□□□ -0.2
PCGF1Q9BSM1 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PCGF1Q9BSM1 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
PCGF1Q9BSM1 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PCGF1Q9BSM1 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC13.78□□□□□ -0.2
PCGF1Q9BSM1 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
PCGF1Q9BSM1 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PCGF1Q9BSM1 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
PCGF1Q9BSM1 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC13.78□□□□□ -0.2
PCGF1Q9BSM1 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
PCGF1Q9BSM1 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
PCGF1Q9BSM1 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC13.78□□□□□ -0.2
PCGF1Q9BSM1 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
PCGF1Q9BSM1 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC13.78□□□□□ -0.2
PCGF1Q9BSM1 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
PCGF1Q9BSM1 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
PCGF1Q9BSM1 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
PCGF1Q9BSM1 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
PCGF1Q9BSM1 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
PCGF1Q9BSM1 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
PCGF1Q9BSM1 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PCGF1Q9BSM1 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PCGF1Q9BSM1 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
PCGF1Q9BSM1 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PCGF1Q9BSM1 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
PCGF1Q9BSM1 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
PCGF1Q9BSM1 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
PCGF1Q9BSM1 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
PCGF1Q9BSM1 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PCGF1Q9BSM1 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC13.77□□□□□ -0.21
PCGF1Q9BSM1 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
PCGF1Q9BSM1 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
PCGF1Q9BSM1 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
PCGF1Q9BSM1 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
PCGF1Q9BSM1 LBH-203ENST00000404397 543 ntTSL 4 BASIC13.77□□□□□ -0.21
PCGF1Q9BSM1 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC13.77□□□□□ -0.21
PCGF1Q9BSM1 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC13.77□□□□□ -0.21
PCGF1Q9BSM1 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC13.77□□□□□ -0.21
PCGF1Q9BSM1 METTL21AP1-201ENST00000438852 635 ntBASIC13.77□□□□□ -0.21
PCGF1Q9BSM1 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC13.77□□□□□ -0.21
PCGF1Q9BSM1 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC13.77□□□□□ -0.21
PCGF1Q9BSM1 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PCGF1Q9BSM1 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
PCGF1Q9BSM1 SPDYE11-202ENST00000450699 704 ntBASIC13.77□□□□□ -0.21
PCGF1Q9BSM1 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
PCGF1Q9BSM1 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
PCGF1Q9BSM1 KRT18P28-201ENST00000453838 1332 ntBASIC13.77□□□□□ -0.21
PCGF1Q9BSM1 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC13.77□□□□□ -0.21
PCGF1Q9BSM1 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
PCGF1Q9BSM1 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC13.77□□□□□ -0.21
PCGF1Q9BSM1 SLC22A20-204ENST00000530038 1673 ntBASIC13.77□□□□□ -0.21
PCGF1Q9BSM1 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC13.77□□□□□ -0.21
PCGF1Q9BSM1 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC13.77□□□□□ -0.21
PCGF1Q9BSM1 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC13.77□□□□□ -0.21
PCGF1Q9BSM1 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC13.77□□□□□ -0.21
PCGF1Q9BSM1 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
PCGF1Q9BSM1 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
PCGF1Q9BSM1 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
PCGF1Q9BSM1 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
PCGF1Q9BSM1 IGHV3OR16-6-201ENST00000568775 360 ntBASIC13.77□□□□□ -0.21
PCGF1Q9BSM1 SPDYE9P-201ENST00000570642 692 ntBASIC13.77□□□□□ -0.21
PCGF1Q9BSM1 MPDU1-223ENST00000582151 728 ntBASIC13.77□□□□□ -0.21
PCGF1Q9BSM1 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC13.77□□□□□ -0.21
PCGF1Q9BSM1 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC13.77□□□□□ -0.21
PCGF1Q9BSM1 SPDYE10P-202ENST00000612005 668 ntBASIC13.77□□□□□ -0.21
PCGF1Q9BSM1 SPDYE8P-202ENST00000612377 668 ntBASIC13.77□□□□□ -0.21
PCGF1Q9BSM1 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
PCGF1Q9BSM1 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PCGF1Q9BSM1 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PCGF1Q9BSM1 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PCGF1Q9BSM1 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
PCGF1Q9BSM1 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC13.77□□□□□ -0.21
PCGF1Q9BSM1 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PCGF1Q9BSM1 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PCGF1Q9BSM1 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PCGF1Q9BSM1 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
PCGF1Q9BSM1 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
PCGF1Q9BSM1 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
PCGF1Q9BSM1 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PCGF1Q9BSM1 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PCGF1Q9BSM1 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC13.76□□□□□ -0.21
PCGF1Q9BSM1 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PCGF1Q9BSM1 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC13.76□□□□□ -0.21
PCGF1Q9BSM1 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
PCGF1Q9BSM1 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PCGF1Q9BSM1 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
PCGF1Q9BSM1 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
PCGF1Q9BSM1 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC13.76□□□□□ -0.21
PCGF1Q9BSM1 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC13.76□□□□□ -0.21
PCGF1Q9BSM1 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC13.76□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms