Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
VGLL1Q99990 LINC01144-201ENST00000626198 1710 ntBASIC12.47□□□□□ -0.41
VGLL1Q99990 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
VGLL1Q99990 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC12.47□□□□□ -0.41
VGLL1Q99990 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
VGLL1Q99990 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
VGLL1Q99990 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
VGLL1Q99990 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
VGLL1Q99990 HLA-DQB2-231ENST00000435145 2026 ntBASIC12.47□□□□□ -0.41
VGLL1Q99990 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
VGLL1Q99990 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
VGLL1Q99990 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
VGLL1Q99990 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
VGLL1Q99990 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
VGLL1Q99990 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
VGLL1Q99990 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
VGLL1Q99990 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
VGLL1Q99990 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
VGLL1Q99990 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC12.46□□□□□ -0.41
VGLL1Q99990 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
VGLL1Q99990 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
VGLL1Q99990 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
VGLL1Q99990 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
VGLL1Q99990 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.41
VGLL1Q99990 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
VGLL1Q99990 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
VGLL1Q99990 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
VGLL1Q99990 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
VGLL1Q99990 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
VGLL1Q99990 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
VGLL1Q99990 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC12.46□□□□□ -0.41
VGLL1Q99990 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
VGLL1Q99990 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
VGLL1Q99990 AC092384.3-202ENST00000564646 2873 ntBASIC12.46□□□□□ -0.41
VGLL1Q99990 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
VGLL1Q99990 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
VGLL1Q99990 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
VGLL1Q99990 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC12.46□□□□□ -0.41
VGLL1Q99990 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC12.46□□□□□ -0.41
VGLL1Q99990 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
VGLL1Q99990 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.41
VGLL1Q99990 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC12.46□□□□□ -0.41
VGLL1Q99990 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
VGLL1Q99990 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC12.46□□□□□ -0.41
VGLL1Q99990 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
VGLL1Q99990 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
VGLL1Q99990 WDR53-204ENST00000433160 887 ntTSL 5 BASIC12.46□□□□□ -0.41
VGLL1Q99990 SLC25A6P2-201ENST00000497974 877 ntBASIC12.46□□□□□ -0.41
VGLL1Q99990 MSRA-206ENST00000521209 814 ntTSL 3 BASIC12.46□□□□□ -0.41
VGLL1Q99990 SART3-203ENST00000546611 1184 ntBASIC12.46□□□□□ -0.41
VGLL1Q99990 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC12.46□□□□□ -0.41
VGLL1Q99990 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC12.46□□□□□ -0.41
VGLL1Q99990 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC12.46□□□□□ -0.41
VGLL1Q99990 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC12.46□□□□□ -0.41
VGLL1Q99990 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC12.46□□□□□ -0.41
VGLL1Q99990 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC12.46□□□□□ -0.41
VGLL1Q99990 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC12.46□□□□□ -0.41
VGLL1Q99990 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC12.46□□□□□ -0.41
VGLL1Q99990 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC12.46□□□□□ -0.41
VGLL1Q99990 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
VGLL1Q99990 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
VGLL1Q99990 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
VGLL1Q99990 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.42
VGLL1Q99990 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC12.46□□□□□ -0.42
VGLL1Q99990 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC12.46□□□□□ -0.42
VGLL1Q99990 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC12.46□□□□□ -0.42
VGLL1Q99990 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.42
VGLL1Q99990 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC12.46□□□□□ -0.42
VGLL1Q99990 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.42
VGLL1Q99990 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC12.46□□□□□ -0.42
VGLL1Q99990 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
VGLL1Q99990 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
VGLL1Q99990 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
VGLL1Q99990 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC12.45□□□□□ -0.42
VGLL1Q99990 AC144831.1-201ENST00000573312 2656 ntBASIC12.45□□□□□ -0.42
VGLL1Q99990 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
VGLL1Q99990 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC12.45□□□□□ -0.42
VGLL1Q99990 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC12.45□□□□□ -0.42
VGLL1Q99990 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
VGLL1Q99990 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
VGLL1Q99990 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
VGLL1Q99990 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
VGLL1Q99990 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC12.45□□□□□ -0.42
VGLL1Q99990 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC12.45□□□□□ -0.42
VGLL1Q99990 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
VGLL1Q99990 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
VGLL1Q99990 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
VGLL1Q99990 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
VGLL1Q99990 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
VGLL1Q99990 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
VGLL1Q99990 LSM5-204ENST00000409909 740 ntTSL 2 BASIC12.45□□□□□ -0.42
VGLL1Q99990 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
VGLL1Q99990 ARTN-206ENST00000472435 402 ntTSL 3 BASIC12.45□□□□□ -0.42
VGLL1Q99990 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC12.45□□□□□ -0.42
VGLL1Q99990 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC12.45□□□□□ -0.42
VGLL1Q99990 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
VGLL1Q99990 RNF151-202ENST00000569210 853 ntTSL 2 BASIC12.45□□□□□ -0.42
VGLL1Q99990 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
VGLL1Q99990 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
VGLL1Q99990 AL355877.3-201ENST00000622820 899 ntBASIC12.45□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms