Protein–RNA interactions for Protein: Q99500

S1PR3, Sphingosine 1-phosphate receptor 3, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
S1PR3Q99500 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
S1PR3Q99500 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
S1PR3Q99500 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
S1PR3Q99500 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC13.56□□□□□ -0.24
S1PR3Q99500 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC13.55□□□□□ -0.24
S1PR3Q99500 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
S1PR3Q99500 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
S1PR3Q99500 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
S1PR3Q99500 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
S1PR3Q99500 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
S1PR3Q99500 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
S1PR3Q99500 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
S1PR3Q99500 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
S1PR3Q99500 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
S1PR3Q99500 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC13.55□□□□□ -0.24
S1PR3Q99500 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC13.55□□□□□ -0.24
S1PR3Q99500 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC13.55□□□□□ -0.24
S1PR3Q99500 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
S1PR3Q99500 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
S1PR3Q99500 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
S1PR3Q99500 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC13.55□□□□□ -0.24
S1PR3Q99500 CRYGEP-201ENST00000412192 528 ntBASIC13.55□□□□□ -0.24
S1PR3Q99500 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC13.55□□□□□ -0.24
S1PR3Q99500 AC009947.1-201ENST00000444350 727 ntBASIC13.55□□□□□ -0.24
S1PR3Q99500 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC13.55□□□□□ -0.24
S1PR3Q99500 RPL13AP23-201ENST00000480739 586 ntBASIC13.55□□□□□ -0.24
S1PR3Q99500 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC13.55□□□□□ -0.24
S1PR3Q99500 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC13.55□□□□□ -0.24
S1PR3Q99500 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC13.55□□□□□ -0.24
S1PR3Q99500 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC13.55□□□□□ -0.24
S1PR3Q99500 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
S1PR3Q99500 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
S1PR3Q99500 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC13.55□□□□□ -0.24
S1PR3Q99500 Z83851.2-201ENST00000609564 659 ntBASIC13.55□□□□□ -0.24
S1PR3Q99500 AC120114.3-201ENST00000611923 658 ntBASIC13.55□□□□□ -0.24
S1PR3Q99500 AL645728.2-201ENST00000641974 660 ntBASIC13.55□□□□□ -0.24
S1PR3Q99500 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
S1PR3Q99500 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
S1PR3Q99500 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
S1PR3Q99500 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
S1PR3Q99500 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC13.55□□□□□ -0.24
S1PR3Q99500 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC13.55□□□□□ -0.24
S1PR3Q99500 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC13.55□□□□□ -0.24
S1PR3Q99500 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
S1PR3Q99500 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
S1PR3Q99500 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
S1PR3Q99500 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
S1PR3Q99500 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
S1PR3Q99500 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
S1PR3Q99500 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
S1PR3Q99500 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
S1PR3Q99500 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
S1PR3Q99500 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC13.55□□□□□ -0.24
S1PR3Q99500 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC13.55□□□□□ -0.24
S1PR3Q99500 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
S1PR3Q99500 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
S1PR3Q99500 AL596087.1-201ENST00000400979 1969 ntBASIC13.54□□□□□ -0.24
S1PR3Q99500 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
S1PR3Q99500 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
S1PR3Q99500 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
S1PR3Q99500 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
S1PR3Q99500 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC13.54□□□□□ -0.24
S1PR3Q99500 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
S1PR3Q99500 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC13.54□□□□□ -0.24
S1PR3Q99500 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
S1PR3Q99500 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
S1PR3Q99500 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
S1PR3Q99500 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
S1PR3Q99500 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
S1PR3Q99500 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
S1PR3Q99500 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
S1PR3Q99500 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
S1PR3Q99500 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
S1PR3Q99500 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
S1PR3Q99500 HARS-203ENST00000431330 1774 ntTSL 2 BASIC13.54□□□□□ -0.24
S1PR3Q99500 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC13.54□□□□□ -0.24
S1PR3Q99500 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
S1PR3Q99500 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
S1PR3Q99500 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC13.54□□□□□ -0.24
S1PR3Q99500 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
S1PR3Q99500 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
S1PR3Q99500 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
S1PR3Q99500 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC13.54□□□□□ -0.24
S1PR3Q99500 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC13.54□□□□□ -0.24
S1PR3Q99500 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
S1PR3Q99500 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC13.54□□□□□ -0.24
S1PR3Q99500 AC021097.1-201ENST00000607902 574 ntBASIC13.54□□□□□ -0.24
S1PR3Q99500 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
S1PR3Q99500 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
S1PR3Q99500 AL161772.1-201ENST00000610494 4412 ntBASIC13.54□□□□□ -0.24
S1PR3Q99500 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC13.54□□□□□ -0.24
S1PR3Q99500 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
S1PR3Q99500 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
S1PR3Q99500 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC13.54□□□□□ -0.24
S1PR3Q99500 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
S1PR3Q99500 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
S1PR3Q99500 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
S1PR3Q99500 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
S1PR3Q99500 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
S1PR3Q99500 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms