Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ECHDC3Q96DC8 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
ECHDC3Q96DC8 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC16.28■□□□□ 0.2
ECHDC3Q96DC8 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
ECHDC3Q96DC8 AC084018.2-201ENST00000613093 2607 ntBASIC16.28■□□□□ 0.2
ECHDC3Q96DC8 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ECHDC3Q96DC8 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
ECHDC3Q96DC8 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ECHDC3Q96DC8 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
ECHDC3Q96DC8 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
ECHDC3Q96DC8 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC16.27■□□□□ 0.2
ECHDC3Q96DC8 FO538757.1-201ENST00000623083 1397 ntBASIC16.27■□□□□ 0.2
ECHDC3Q96DC8 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ECHDC3Q96DC8 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
ECHDC3Q96DC8 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC16.27■□□□□ 0.2
ECHDC3Q96DC8 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
ECHDC3Q96DC8 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC16.27■□□□□ 0.2
ECHDC3Q96DC8 AL118508.1-201ENST00000613502 2345 ntBASIC16.27■□□□□ 0.2
ECHDC3Q96DC8 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.27■□□□□ 0.2
ECHDC3Q96DC8 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ECHDC3Q96DC8 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ECHDC3Q96DC8 VMA21-202ENST00000370361 693 ntTSL 5 BASIC16.27■□□□□ 0.2
ECHDC3Q96DC8 TREML5P-201ENST00000421694 576 ntBASIC16.27■□□□□ 0.2
ECHDC3Q96DC8 AL139010.1-201ENST00000454878 894 ntBASIC16.27■□□□□ 0.2
ECHDC3Q96DC8 AC097493.3-201ENST00000509725 367 ntBASIC16.27■□□□□ 0.2
ECHDC3Q96DC8 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC16.27■□□□□ 0.2
ECHDC3Q96DC8 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC16.27■□□□□ 0.2
ECHDC3Q96DC8 SPDYE12P-201ENST00000618416 771 ntBASIC16.27■□□□□ 0.2
ECHDC3Q96DC8 AC073592.8-201ENST00000624126 511 ntBASIC16.27■□□□□ 0.2
ECHDC3Q96DC8 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
ECHDC3Q96DC8 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
ECHDC3Q96DC8 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC16.27■□□□□ 0.19
ECHDC3Q96DC8 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC16.27■□□□□ 0.19
ECHDC3Q96DC8 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
ECHDC3Q96DC8 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
ECHDC3Q96DC8 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC16.27■□□□□ 0.19
ECHDC3Q96DC8 AC092364.2-201ENST00000596710 2692 ntBASIC16.27■□□□□ 0.19
ECHDC3Q96DC8 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC16.27■□□□□ 0.19
ECHDC3Q96DC8 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC16.27■□□□□ 0.19
ECHDC3Q96DC8 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.19
ECHDC3Q96DC8 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ECHDC3Q96DC8 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ECHDC3Q96DC8 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ECHDC3Q96DC8 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ECHDC3Q96DC8 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
ECHDC3Q96DC8 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
ECHDC3Q96DC8 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC16.26■□□□□ 0.19
ECHDC3Q96DC8 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ECHDC3Q96DC8 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ECHDC3Q96DC8 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC16.26■□□□□ 0.19
ECHDC3Q96DC8 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ECHDC3Q96DC8 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC16.26■□□□□ 0.19
ECHDC3Q96DC8 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ECHDC3Q96DC8 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
ECHDC3Q96DC8 SPDYE17-201ENST00000412399 783 ntBASIC16.26■□□□□ 0.19
ECHDC3Q96DC8 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC16.26■□□□□ 0.19
ECHDC3Q96DC8 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ECHDC3Q96DC8 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC16.26■□□□□ 0.19
ECHDC3Q96DC8 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC16.26■□□□□ 0.19
ECHDC3Q96DC8 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
ECHDC3Q96DC8 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
ECHDC3Q96DC8 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
ECHDC3Q96DC8 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ECHDC3Q96DC8 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
ECHDC3Q96DC8 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
ECHDC3Q96DC8 AC006449.5-201ENST00000610658 2098 ntBASIC16.26■□□□□ 0.19
ECHDC3Q96DC8 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ECHDC3Q96DC8 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
ECHDC3Q96DC8 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
ECHDC3Q96DC8 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
ECHDC3Q96DC8 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
ECHDC3Q96DC8 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC16.26■□□□□ 0.19
ECHDC3Q96DC8 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC16.26■□□□□ 0.19
ECHDC3Q96DC8 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
ECHDC3Q96DC8 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ECHDC3Q96DC8 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
ECHDC3Q96DC8 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
ECHDC3Q96DC8 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
ECHDC3Q96DC8 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC16.26■□□□□ 0.19
ECHDC3Q96DC8 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ECHDC3Q96DC8 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC16.26■□□□□ 0.19
ECHDC3Q96DC8 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ECHDC3Q96DC8 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ECHDC3Q96DC8 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ECHDC3Q96DC8 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
ECHDC3Q96DC8 AL136982.4-201ENST00000437689 1740 ntBASIC16.25■□□□□ 0.19
ECHDC3Q96DC8 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
ECHDC3Q96DC8 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ECHDC3Q96DC8 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ECHDC3Q96DC8 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
ECHDC3Q96DC8 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC16.25■□□□□ 0.19
ECHDC3Q96DC8 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC16.25■□□□□ 0.19
ECHDC3Q96DC8 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ECHDC3Q96DC8 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ECHDC3Q96DC8 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
ECHDC3Q96DC8 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
ECHDC3Q96DC8 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
ECHDC3Q96DC8 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
ECHDC3Q96DC8 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ECHDC3Q96DC8 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms